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Eftychios A. Pnevmatikakis
Eftychios A. Pnevmatikakis
Meta Reality Labs
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Simultaneous denoising, deconvolution, and demixing of calcium imaging data
EA Pnevmatikakis, D Soudry, Y Gao, TA Machado, J Merel, D Pfau, ...
Neuron 89 (2), 285-299, 2016
11282016
NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data
EA Pnevmatikakis, A Giovannucci
Journal of Neuroscience Methods 291, 83-94, 2017
8692017
CaImAn an open source tool for scalable calcium imaging data analysis
A Giovannucci, J Friedrich, P Gunn, J Kalfon, BL Brown, SA Koay, ...
elife 8, e38173, 2019
8072019
Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data
P Zhou, SL Resendez, J Rodriguez-Romaguera, JC Jimenez, SQ Neufeld, ...
elife 7, e28728, 2018
6682018
A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters
KD Piatkevich, EE Jung, C Straub, C Linghu, D Park, HJ Suk, ...
Nature chemical biology 14 (4), 352-360, 2018
3672018
Simultaneous multi-plane imaging of neural circuits
W Yang, JK Miller, L Carrillo-Reid, E Pnevmatikakis, L Paninski, R Yuste, ...
Neuron 89 (2), 269-284, 2016
2602016
Cerebellar granule cells acquire a widespread predictive feedback signal during motor learning
A Giovannucci, A Badura, B Deverett, F Najafi, TD Pereira, Z Gao, I Ozden, ...
Nature neuroscience 20 (5), 727-734, 2017
2312017
Population-level representation of a temporal sequence underlying song production in the zebra finch
MA Picardo, J Merel, KA Katlowitz, D Vallentin, DE Okobi, SE Benezra, ...
Neuron 90 (4), 866-876, 2016
1562016
Differential emergence and stability of sensory and temporal representations in context-specific hippocampal sequences
J Taxidis, EA Pnevmatikakis, CC Dorian, AL Mylavarapu, JS Arora, ...
Neuron 108 (5), 984-998. e9, 2020
1332020
Excitatory and inhibitory subnetworks are equally selective during decision-making and emerge simultaneously during learning
F Najafi, GF Elsayed, R Cao, E Pnevmatikakis, PE Latham, ...
Neuron 105 (1), 165-179. e8, 2020
1272020
Analysis pipelines for calcium imaging data
EA Pnevmatikakis
Current opinion in neurobiology 55, 15-21, 2019
1022019
Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input
A Ramirez, EA Pnevmatikakis, J Merel, L Paninski, KD Miller, RM Bruno
Nature neuroscience 17 (6), 866-875, 2014
922014
Bayesian spike inference from calcium imaging data
EA Pnevmatikakis, J Merel, A Pakman, L Paninski
Asilomar Conference on Signals, Systems and Computers, 2013, 2013
882013
MULTI-INPUT MULTI-OUTPUT TIME ENCODING AND DECODING MACHINES
AA Lazar, EA Pnevmatikakis
US Patent 20,120,039,399, 2012
882012
Onacid: Online analysis of calcium imaging data in real time
A Giovannucci, J Friedrich, M Kaufman, A Churchland, D Chklovskii, ...
Advances in neural information processing systems 30, 2017
842017
Video time encoding machines
AA Lazar, EA Pnevmatikakis
IEEE Transactions on Neural Networks 22 (3), 461-473, 2011
832011
Reinforcement learning recruits somata and apical dendrites across layers of primary sensory cortex
CO Lacefield, EA Pnevmatikakis, L Paninski, RM Bruno
Cell reports 26 (8), 2000-2008. e2, 2019
772019
Robust learning of low dimensional dynamics from large neural ensembles
D Pfau, EA Pnevmatikakis, L Paninski
Advances in Neural Information Processing Systems, 2391-2399, 2013
742013
Primacy of flexor locomotor pattern revealed by ancestral reversion of motor neuron identity
TA Machado, E Pnevmatikakis, L Paninski, TM Jessell, A Miri
Cell 162 (2), 338-350, 2015
712015
Faithful representation of stimuli with a population of integrate-and-fire neurons
AA Lazar, EA Pnevmatikakis
Neural computation 20 (11), 2715-2744, 2008
692008
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