Jonathan Badger

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Chris DupontJ. Craig Venter InstituteVerificeret mail på jcvi.org
Jonathan A. EisenProfessor, University of California, Davis (UC Davis), Department of Evolution and EcologyVerificeret mail på ucdavis.edu
Naomi WardProfessor, Microbiology, Immunology, and Pathology, Colorado State UniversityVerificeret mail på colostate.edu
Natalie Fedorova AbramsNCIVerificeret mail på nih.gov
Eric E. AllenProfessor of Marine Microbiology, University of California San DiegoVerificeret mail på ucsd.edu
Hamidreza ChitsazLenzoomerVerificeret mail på algorithmicslab.org
Jennifer WortmanVice President, Clinical Discovery and Research Technologies, Seres TherapeuticsVerificeret mail på serestherapeutics.com
Garry MyersiThree Institute, University of Technology SydneyVerificeret mail på uts.edu.au
Michael C. SchatzBloomberg Distinguished Professor, Johns Hopkins UniversityVerificeret mail på cs.jhu.edu
Ariel S SchwartzVerificeret mail på cs.berkeley.edu
Paul KeimRegents Professor, Northern Arizona University, TGen, Executive Director of Pathogen and McrobiomeVerificeret mail på nau.edu
Talima PearsonResearch Professor, Biological Sciences, Northern Arizona UniversityVerificeret mail på NAU.edu
Mathangi ThiagarajanProject Director, Frederick National Lab for Cancer ResearchVerificeret mail på nih.gov
Tao JiangUC RiversideVerificeret mail på cs.ucr.edu
Torsten SeemannThe University of MelbourneVerificeret mail på unimelb.edu.au
Jane M CarltonBloomberg Distinguished Professor; Johns Hopkins Malaria Research InstituteVerificeret mail på jhu.edu
Steven SalzbergBloomberg Distinguished Professor, Johns Hopkins UniversityVerificeret mail på jhu.edu

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Jonathan Badger

Staff Scientist, National Cancer Institute

Verificeret mail på nih.gov - Startside

Microbiome Genomics Metagenomics Bioinformatics Phylogeny


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Structure, function and diversity of the healthy human microbiome Human Microbiome Project Consortium Nature 486 (7402), 207-14, 2012	10894	2012
A framework for human microbiome research Human Microbiome Consortium Nature. E-pub ahead of print. doi 10, 2012	2514*	2012
The Phaeodactylum genome reveals the evolutionary history of diatom genomes C Bowler, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, ... Nature 456 (7219), 239-244, 2008	1970	2008
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ... Nature 390 (6658), 364-370, 1997	1748	1997
Fecal microbiota transplant overcomes resistance to anti–PD-1 therapy in melanoma patients D Davar, AK Dzutsev, JA McCulloch, RR Rodrigues, JM Chauvin, ... Science 371 (6529), 595-602, 2021	1171	2021
Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils NL Ward, JF Challacombe, PH Janssen, B Henrissat, PM Coutinho, M Wu, ... Applied and environmental microbiology 75 (7), 2046-2056, 2009	1088	2009
Comparative genomics of trypanosomatid parasitic protozoa NM El-Sayed, PJ Myler, G Blandin, M Berriman, J Crabtree, G Aggarwal, ... Science 309 (5733), 404-409, 2005	1045	2005
The Ectocarpus genome and the independent evolution of multicellularity in brown algae JM Cock, L Sterck, P Rouzé, D Scornet, AE Allen, G Amoutzias, ... Nature 465 (7298), 617-621, 2010	1017	2010
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ... PLoS biology 4 (9), e286, 2006	877	2006
A catalog of reference genomes from the human microbiome Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ... Science 328 (5981), 994-999, 2010	858	2010
Wild mouse gut microbiota promotes host fitness and improves disease resistance SP Rosshart, BG Vassallo, D Angeletti, DS Hutchinson, AP Morgan, ... Cell 171 (5), 1015-1028. e13, 2017	793	2017
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ... Science 324 (5924), 268-272, 2009	750	2009
An information-based sequence distance and its application to whole mitochondrial genome phylogeny M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang Bioinformatics 17 (2), 149-154, 2001	704	2001
Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ... PLoS biology 3 (1), e15, 2005	679	2005
Structure, function and diversity of the healthy human microbiome HMP Consortium nature 486 (7402), 207-214, 2012	668	2012
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ... PLoS genetics 4 (4), e1000046, 2008	594	2008
Dietary fiber and probiotics influence the gut microbiome and melanoma immunotherapy response CN Spencer, JL McQuade, V Gopalakrishnan, JA McCulloch, M Vetizou, ... Science 374 (6575), 1632-1640, 2021	576	2021
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum MA Van Den Berg, R Albang, K Albermann, JH Badger, JM Daran, ... Nature biotechnology 26 (10), 1161-1168, 2008	539	2008
Laboratory mice born to wild mice have natural microbiota and model human immune responses SP Rosshart, J Herz, BG Vassallo, A Hunter, MK Wall, JH Badger, ... Science 365 (6452), eaaw4361, 2019	510	2019
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen PloS one 7 (3), e34064, 2012	505	2012

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