Jingyi Jessica Li

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Wei Vivian LiAssistant Professor, Department of Statistics, University of California, RiversideVerificeret mail på ucr.edu
peter bickelProfessor of Statistics, UC BerkeleyVerificeret mail på stat.berkeley.edu
Xin TongAssociate Professor, Department of Data Sciences and Operations, University of Southern CaliforniaVerificeret mail på marshall.usc.edu
Haiyan Huang, ProfessorUniversity of California, BerkeleyVerificeret mail på stat.berkeley.edu
James B. BrownLawrence Berkeley National Laboratory; UC Berkeley; Arva Intelligence, Inc.Verificeret mail på lbl.gov
Michael B. EisenInvestigator, HHMI and Associate Professor of Molecular and Cell Biology, UC BerkeleyVerificeret mail på berkeley.edu
Eleazar EskinUniversity of California, Los AngelesVerificeret mail på cs.ucla.edu
Dat DuongUniversity of California, Los AngelesVerificeret mail på g.ucla.edu
Guo-Liang "Chewie" ChewBioinformatics Manager, Genome Interpretation, Illumina Inc.Verificeret mail på illumina.com
Kai-Wei ChangAssociate Professor, UCLAVerificeret mail på kwchang.net
Ci-Ren JiangNational Taiwan UniversityVerificeret mail på ntu.edu.tw
Wanlu LiuZJU-UoE Institute, Zhejiang UniversityVerificeret mail på intl.zju.edu.cn
Sean ThomasAltius InstituteVerificeret mail på altius.org
Susan CelnikerVerificeret mail på lbl.gov
Steven E. BrennerUniversity of California, BerkeleyVerificeret mail på berkeley.edu
Yang FengProfessor of Biostatistics, School of Global Public Health, New York UniversityVerificeret mail på nyu.edu
Zahra S. RazaeePostdoctoral Scientist, Cedars Sinai Medical CenterVerificeret mail på g.ucla.edu
Jixian ZhaiSingle-molecule and Single-cell TranscriptomicsVerificeret mail på sustech.edu.cn
Steven E. JacobsenUCLAVerificeret mail på ucla.edu
Daniel M. AbramsProfessor of Engineering Sciences and Applied Mathematics, Northwestern UniversityVerificeret mail på northwestern.edu

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Jingyi Jessica Li

Professor, Department of Statistics, University of California at Los Angeles (UCLA)

Verificeret mail på stat.ucla.edu - Startside

Statistical Rigor in Genomics Junction of Statistics and Biology


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012	17520	2012
An accurate and robust imputation method scImpute for single-cell RNA-seq data WV Li, JJ Li Nature Communications 9 (1), 997, 2018	733	2018
Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions S MacArthur, XY Li, J Li, JB Brown, HC Chu, L Zeng, BP Grondona, ... Genome biology 10 (7), 1-26, 2009	403	2009
System wide analyses have underestimated protein abundances and the importance of transcription in mammals JJ Li, PJ Bickel, MD Biggin PeerJ 2, e270, 2014	343	2014
Comparative analysis of the transcriptome across distant species MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ... Nature 512 (7515), 445-448, 2014	339	2014
Comparative analysis of regulatory information and circuits across distant species AP Boyle, CL Araya, C Brdlik, P Cayting, C Cheng, Y Cheng, K Gardner, ... Nature 512 (7515), 453-456, 2014	233	2014
Statistics or biology: the zero-inflation controversy about scRNA-seq data R Jiang, T Sun, D Song, JJ Li Genome biology 23 (1), 1-24, 2022	224	2022
Exaggerated false positives by popular differential expression methods when analyzing human population samples Y Li, X Ge, F Peng, W Li, JJ Li Genome biology 23 (1), 79, 2022	210	2022
Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation JJ Li, CR Jiang, JB Brown, H Huang, PJ Bickel Proceedings of the National Academy of Sciences 108 (50), 19867-19872, 2011	195	2011
DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila WW Fisher, JJ Li, AS Hammonds, JB Brown, BD Pfeiffer, R Weiszmann, ... Proceedings of the National Academy of Sciences 109 (52), 21330-21335, 2012	164	2012
Benchmarking computational doublet-detection methods for single-cell RNA sequencing data NM Xi, JJ Li Cell systems 12 (2), 176-194. e6, 2021	163	2021
Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data JJ Li, H Huang, PJ Bickel, SE Brenner Genome research 24 (7), 1086-1101, 2014	114	2014
scDesign2: a transparent simulator that generates high-fidelity single-cell gene expression count data with gene correlations captured T Sun, D Song, WV Li, JJ Li Genome biology 22 (1), 1-37, 2021	107	2021
Neyman-Pearson classification algorithms and NP receiver operating characteristics X Tong, Y Feng, JJ Li Science advances 4 (2), eaao1659, 2018	88	2018
Oct4 was a novel target of Wnt signaling pathway J Li, J Li, B Chen Molecular and cellular biochemistry 362 (1-2), 233-240, 2012	78	2012
Modeling and analysis of RNA-seq data: a review from a statistical perspective WV Li, JJ Li Quantitative Biology 6 (3), 195-209, 2018	75	2018
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics D Song, Q Wang, G Yan, T Liu, T Sun, JJ Li Nature Biotechnology 42 (2), 247-252, 2024	72	2024
PseudotimeDE: inference of differential gene expression along cell pseudotime with well-calibrated p-values from single-cell RNA sequencing data D Song, JJ Li Genome biology 22 (1), 124, 2021	69	2021
Statistics requantitates the central dogma JJ Li, MD Biggin Science 347 (6226), 1066-1067, 2015	67	2015
A statistical simulator scDesign for rational scRNA-seq experimental design WV Li, JJ Li Bioinformatics 35 (14), i41–i50, 2019	66	2019

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