John Quackenbush

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Benjamin Haibe-KainsScientist (Principal Investigator), Princess Margaret Cancer Centre, University Health NetworkVerificeret mail på uhnresearch.ca
Kimberly GlassAssociate Scientist, Brigham and Women's Hospital; Assistant Professor of Medicine, Harvard MedicalVerificeret mail på channing.harvard.edu
Hugo AertsDirector AI in Medicine (AIM) @ Harvard-MGB | Professor @ MaastrichtUVerificeret mail på dfci.harvard.edu
Joseph A. WhiteDana-Farber Cancer InstituteVerificeret mail på jimmy.harvard.edu
Aedin CulhaneUniversity of Limerick School of MedicineVerificeret mail på ul.ie
Alvis BrazmaEMBL Scientist EmeritusVerificeret mail på ebi.ac.uk
Razvan SultanaBioinformatician, Garvan Institute, Sydney, AustraliaVerificeret mail på garvan.org.au
marieke kuijjerUniversity of OsloVerificeret mail på ncmm.uio.no
Geo PerteaData/Software Engineer, Lieber Institute for Brain DevelopmentVerificeret mail på jhu.edu
Christian StoeckertReseach Professor of Genetics, University of PennsylvaniaVerificeret mail på upenn.edu
John PlatigAssistant Prof. University of VirginiaVerificeret mail på virginia.edu
Helen CaustonColumbia UniversityVerificeret mail på cumc.columbia.edu
Chintan ParmarAstraZeneca (past: PathAI, Novartis, Harvard-DFCI-BWH, ISI-Kolkata, DAIICT)Verificeret mail på astrazeneca.com
Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Senior ScientistVerificeret mail på ebi.ac.uk
Ed SilvermanVerificeret mail på channing.harvard.edu
Ronald TaylorSupervisory Biologist (Bioinformatics) at the National Cancer InstituteVerificeret mail på nih.gov
Gavin SherlockProfessor of Genetics, Stanford UniversityVerificeret mail på stanford.edu
Paul SpellmanUniversity of California Los AngelesVerificeret mail på mednet.ucla.edu
Gianluca BontempiFull professor, Machine Learning Group, Université Libre de BruxellesVerificeret mail på ulb.ac.be
David A. SchwartzProfessor of Medicine and Immunology, University of ColoradoVerificeret mail på ucdenver.edu

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John Quackenbush

Harvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-Farber

Verificeret mail på hsph.harvard.edu

Genomics Bioinformatics Computational Biology Functional Genomics Cancer Genomics


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana Arabidopsis Genome Initiative genomeanalysis@ tgr. org genomeanalysis@ gsf. de nature 408 (6814), 796-815, 2000	11350	2000
TM4: a free, open-source system for microarray data management and analysis AI Saeed, V Sharov, J White, J Li, W Liang, N Bhagabati, J Braisted, ... Biotechniques 34 (2), 374-378, 2003	5470	2003
Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach HJWL Aerts, ER Velazquez, RTH Leijenaar, C Parmar, P Grossmann, ... Nature communications 5 (1), 4006, 2014	5198	2014
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4967	2001
The complete genome sequence of the gastric pathogen Helicobacter pylori JF Tomb, O White, AR Kerlavage, RA Clayton, GG Sutton, ... Nature 388 (6642), 539-547, 1997	4418	1997
The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005	4045	2005
Artificial intelligence in radiology A Hosny, C Parmar, J Quackenbush, LH Schwartz, HJWL Aerts Nature Reviews Cancer 18 (8), 500-510, 2018	3447	2018
Microarray data normalization and transformation J Quackenbush Nature genetics 32 (4), 496-501, 2002	2904	2002
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi CM Fraser, S Casjens, WM Huang, GG Sutton, R Clayton, R Lathigra, ... Nature 390 (6660), 580-586, 1997	2674	1997
Computational analysis of microarray data J Quackenbush Nature reviews genetics 2 (6), 418-427, 2001	2214	2001
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002	2161	2002
Genesis: cluster analysis of microarray data A Sturn, J Quackenbush, Z Trajanoski Bioinformatics 18 (1), 207-208, 2002	2106	2002
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets G Pertea, X Huang, F Liang, V Antonescu, R Sultana, S Karamycheva, ... Bioinformatics 19 (5), 651-652, 2003	1993	2003
The molecular portraits of breast tumors are conserved across microarray platforms Z Hu, C Fan, DS Oh, JS Marron, X He, BF Qaqish, C Livasy, LA Carey, ... BMC genomics 7, 1-12, 2006	1924	2006
[9] TM4 microarray software suite AI Saeed, NK Bhagabati, JC Braisted, W Liang, V Sharov, EA Howe, J Li, ... Methods in enzymology 411, 134-193, 2006	1876	2006
Corrections: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ... Nature 394 (6688), 101, 1998	1745*	1998
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors JI Herschkowitz, K Simin, VJ Weigman, I Mikaelian, J Usary, Z Hu, ... Genome biology 8, 1-17, 2007	1730	2007
A concise guide to cDNA microarray analysis P Hegde, R Qi, K Abernathy, C Gay, S Dharap, R Gaspard, JE Hughes, ... Biotechniques 29 (3), 548-562, 2000	1386	2000
A gene map of the human genome GD Schuler, MS Boguski, EA Stewart, LD Stein, G Gyapay, K Rice, ... Science 274 (5287), 540-546, 1996	1380	1996
Multiple-laboratory comparison of microarray platforms RA Irizarry, D Warren, F Spencer, IF Kim, S Biswal, BC Frank, ... Nature methods 2 (5), 345-350, 2005	1071	2005

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