| Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix MS Springer, RW Meredith, J Gatesy, CA Emerling, J Park, DL Rabosky, ... PloS one 7 (11), e49521, 2012 | 473 | 2012 |
| Rod monochromacy and the coevolution of cetacean retinal opsins RW Meredith, J Gatesy, CA Emerling, VM York, MS Springer PLoS Genetics 9 (4), e1003432, 2013 | 139 | 2013 |
| Eyes underground: regression of visual protein networks in subterranean mammals CA Emerling, MS Springer Molecular Phylogenetics and Evolution 78, 260-270, 2014 | 127 | 2014 |
| Chitinase genes (CHIAs) provide genomic footprints of a post-Cretaceous dietary radiation in placental mammals CA Emerling, F Delsuc, MW Nachman Science Advances 4 (5), eaar6478, 2018 | 69 | 2018 |
| Genomic evidence for rod monochromacy in sloths and armadillos suggests early subterranean history for Xenarthra CA Emerling, MS Springer Proceedings of the Royal Society B: Biological Sciences 282 (1800), 20142192, 2015 | 69 | 2015 |
| Spectral shifts of mammalian ultraviolet-sensitive pigments (short wavelength-sensitive opsin 1) are associated with eye length and photic niche evolution CA Emerling, HT Huynh, MA Nguyen, RW Meredith, MS Springer Proceedings of the Royal Society B: Biological Sciences 282 (1819), 20151817, 2015 | 66 | 2015 |
| Phylogenetic relationships of living and recently extinct bandicoots based on nuclear and mitochondrial DNA sequences M Westerman, BP Kear, K Aplin, RW Meredith, C Emerling, MS Springer Molecular Phylogenetics and Evolution 62 (1), 97-108, 2012 | 66 | 2012 |
| Phylogenetic relationships of dasyuromorphian marsupials revisited M Westerman, C Krajewski, BP Kear, L Meehan, RW Meredith, ... Zoological Journal of the Linnean Society 176 (3), 686-701, 2016 | 62 | 2016 |
| Waking the undead: Implications of a soft explosive model for the timing of placental mammal diversification MS Springer, CA Emerling, RW Meredith, JE Janečka, E Eizirik, ... Molecular Phylogenetics and Evolution 106, 86-102, 2017 | 52 | 2017 |
| Archelosaurian color vision, parietal eye loss, and the crocodylian nocturnal bottleneck CA Emerling Molecular biology and evolution 34 (3), 666-676, 2017 | 48 | 2017 |
| Genomic insights into the secondary aquatic transition of penguins TL Cole, C Zhou, M Fang, H Pan, DT Ksepka, SR Fiddaman, CA Emerling, ... Nature Communications 13 (1), 3912, 2022 | 36 | 2022 |
| Inactivation of cone-specific phototransduction genes in rod monochromatic cetaceans MS Springer, CA Emerling, N Fugate, R Patel, J Starrett, PA Morin, ... Frontiers in Ecology and Evolution 4, 61, 2016 | 34 | 2016 |
| Northern Spotted Owl (Strix occidentalis caurina) Genome: Divergence with the Barred Owl (Strix varia) and Characterization of Light-Associated Genes ZR Hanna, JB Henderson, JD Wall, CA Emerling, J Fuchs, C Runckel, ... Genome biology and evolution 9 (10), 2522-2545, 2017 | 33 | 2017 |
| Their loss is our gain: regressive evolution in vertebrates provides genomic models for uncovering human disease loci CA Emerling, AD Widjaja, NN Nguyen, MS Springer Journal of Medical Genetics 54 (12), 787-794, 2017 | 30 | 2017 |
| Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales MS Springer, CA Emerling, J Gatesy, J Randall, MA Collin, N Hecker, ... BMC evolutionary biology 19, 1-19, 2019 | 26 | 2019 |
| Independent pseudogenization of CYP2J19 in penguins, owls and kiwis implicates gene in red carotenoid synthesis CA Emerling Molecular phylogenetics and evolution 118, 47-53, 2018 | 26 | 2018 |
| Genomic regression of claw keratin, taste receptor and light-associated genes provides insights into biology and evolutionary origins of snakes CA Emerling Molecular Phylogenetics and Evolution 115, 40-49, 2017 | 26 | 2017 |
| Regressed but not gone: patterns of vision gene loss and retention in subterranean mammals CA Emerling Integrative and Comparative Biology 58 (3), 441-451, 2018 | 23 | 2018 |
| Evolution of the human cold/menthol receptor, TRPM8 S Blanquart, AS Borowiec, P Delcourt, M Figeac, CA Emerling, ... Molecular phylogenetics and evolution 136, 104-118, 2019 | 21 | 2019 |
| Evolution and Diversification of FRUITFULL Genes in Solanaceae DC Maheepala, CA Emerling, A Rajewski, J Macon, M Strahl, ... Frontiers in plant science 10, 43, 2019 | 19 | 2019 |