Alexander Sczyrba

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Tanja WoykeDOE Joint Genome InstituteVerificeret mail på lbl.gov
Andreas SchlüterScientist, CeBiTec, Universität BielefeldVerificeret mail på cebitec.uni-bielefeld.de
Ramunas StepanauskasBigelow Laboratory for Ocean SciencesVerificeret mail på bigelow.org
Alfred PühlerCentrum für Biotechnologie, Universität BielefeldVerificeret mail på cebitec.uni-bielefeld.de
Irena MausForschungszentrum Jülich GmbHVerificeret mail på fz-juelich.de
Andreas BremgesEvonik IndustriesVerificeret mail på evonik.com
Christian RinkeProfessor, University of Innsbruck, Austria & Honorary Associate Professor, UQ, AustraliaVerificeret mail på uibk.ac.at
Brandon K. SwanBattelle National Biodefense InstituteVerificeret mail på ucsbalum.com
Edward M RubinScience CorpsVerificeret mail på science-corps.org
Aaron DarlingIndependentVerificeret mail på illumina.com
Natalia IvanovaDOE Joint Genome InstituteVerificeret mail på lbl.gov
Alice Carolyn McHardyHelmholtz Centre for Infection Research, GermanyVerificeret mail på helmholtz-hzi.de
Daniel WibbergCeBiTecVerificeret mail på cebitec.uni-bielefeld.de
Manuel Martinez-GarciaFull Professor (Microbiology), University of AlicanteVerificeret mail på ua.es
Steven James HallamUniversity of British ColumbiaVerificeret mail på mail.ubc.ca
Alexander GoesmannProfessor für Bioinformatik und Systembiologie, Justus-Liebig-Universität GiessenVerificeret mail på cebitec.uni-bielefeld.de
Dirk BenndorfProf. Microbiology, Anhalt University of Applied ScienceVerificeret mail på hs-anhalt.de
Jan-Fang ChengStaff Scientist, Lawrence Berkeley National LaboratoryVerificeret mail på lbl.gov
Matthias HessUC DavisVerificeret mail på ucdavis.edu
Nicole PoultonBigelow Laboratory for Ocean SciencesVerificeret mail på bigelow.org

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Alexander Sczyrba

Forschungszentrum Jülich (IBG-5), Bielefeld University, Centrum for Biotechnology (CeBiTec)

Verificeret mail på fz-juelich.de

Bioinformatics Cloud Computing Metagenomics


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Insights into the phylogeny and coding potential of microbial dark matter C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ... Nature 499 (7459), 431-437, 2013	2495	2013
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen M Hess, A Sczyrba, R Egan, TW Kim, H Chokhawala, G Schroth, S Luo, ... Science 331 (6016), 463-467, 2011	1515	2011
Severe COVID-19 is marked by a dysregulated myeloid cell compartment J Schulte-Schrepping, N Reusch, D Paclik, K Baßler, S Schlickeiser, ... Cell 182 (6), 1419-1440. e23, 2020	1419	2020
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017	820	2017
Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean BK Swan, M Martinez-Garcia, CM Preston, A Sczyrba, T Woyke, D Lamy, ... Science 333 (6047), 1296-1300, 2011	590	2011
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean BK Swan, B Tupper, A Sczyrba, FM Lauro, M Martinez-Garcia, ... Proceedings of the National Academy of Sciences 110 (28), 11463-11468, 2013	370	2013
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19 JP Bernardes, N Mishra, F Tran, T Bahmer, L Best, JI Blase, D Bordoni, ... Immunity 53 (6), 1296-1314. e9, 2020	337	2020
Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project JA Gilbert, F Meyer, D Antonopoulos, P Balaji, CT Brown, CT Brown, ... Standards in genomic sciences 3, 243-248, 2010	321	2010
UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota JH Campbell, P O’Donoghue, AG Campbell, P Schwientek, A Sczyrba, ... Proceedings of the National Academy of Sciences 110 (14), 5540-5545, 2013	318	2013
Critical assessment of metagenome interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022	273	2022
Early IFN-α signatures and persistent dysfunction are distinguishing features of NK cells in severe COVID-19 B Krämer, R Knoll, L Bonaguro, M ToVinh, J Raabe, ... Immunity 54 (11), 2650-2669. e14, 2021	212	2021
Decontamination of MDA reagents for single cell whole genome amplification T Woyke, A Sczyrba, J Lee, C Rinke, D Tighe, S Clingenpeel, ... PloS one 6 (10), e26161, 2011	186	2011
Expansion of the global RNA virome reveals diverse clades of bacteriophages U Neri, YI Wolf, S Roux, AP Camargo, B Lee, D Kazlauskas, IM Chen, ... Cell 185 (21), 4023-4037. e18, 2022	181	2022
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage TW Ghylin, SL Garcia, F Moya, BO Oyserman, P Schwientek, KT Forest, ... The ISME journal 8 (12), 2503-2516, 2014	180	2014
Back to the future of soil metagenomics J Nesme, W Achouak, SN Agathos, M Bailey, P Baldrian, D Brunel, ... Frontiers in microbiology 7, 73, 2016	178	2016
CAMISIM: simulating metagenomes and microbial communities A Fritz, P Hofmann, S Majda, E Dahms, J Dröge, J Fiedler, TR Lesker, ... Microbiome 7, 1-12, 2019	173	2019
Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates I Maus, DE Koeck, KG Cibis, S Hahnke, YS Kim, T Langer, J Kreubel, ... Biotechnology for biofuels 9, 1-28, 2016	173	2016
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges J Kamke, A Sczyrba, N Ivanova, P Schwientek, C Rinke, K Mavromatis, ... The ISME journal 7 (12), 2287-2300, 2013	146	2013
EMMA: a platform for consistent storage and efficient analysis of microarray data M Dondrup, A Goesmann, D Bartels, J Kalinowski, L Krause, B Linke, ... Journal of biotechnology 106 (2-3), 135-146, 2003	128	2003
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants Y Stolze, A Bremges, M Rumming, C Henke, I Maus, A Pühler, A Sczyrba, ... Biotechnology for biofuels 9, 1-18, 2016	121	2016

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