Nadia Pisanti

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Roberto GrossiProfessor of Computer Science, University of Pisa, ItalyVerificeret mail på unipi.it
Marie-France SagotDirector of Research, InriaVerificeret mail på inria.fr
Gunnar W. KlauHeinrich Heine University DüsseldorfVerificeret mail på hhu.de
Pierre PeterlongoInria - GenScale teamVerificeret mail på inria.fr
Giulia BernardiniAssistant Professor at the University of TriesteVerificeret mail på unimib.it
Murray PattersonAssistant Professor, Georgia State UniversityVerificeret mail på cs.gsu.edu
Leen StougieSenior Researcher CWI, Prof. of Operations Research Vrije Universiteit, AmsterdamVerificeret mail på cwi.nl
Tobias MarschallHeinrich Heine University DüsseldorfVerificeret mail på hhu.de
Alexander SchönhuthProfessor, Faculty for Technology, Bielefeld UniversityVerificeret mail på cebitec.uni-bielefeld.de
Maxime CrochemoreKCLVerificeret mail på kcl.ac.uk
Leo van IerselAssociate professor, TU DelftVerificeret mail på tudelft.nl
Simone ZaccariaGroup Leader, University College London, Cancer InstituteVerificeret mail på ucl.ac.uk
Gustavo SacomotoPost-Doc Researcher INRIA (Lyon, France)Verificeret mail på inria.fr
Riccardo DondiUniversità degli studi di BergamoVerificeret mail på unibg.it
Giulia MenconiVisiting scholar, Computer Science Department, Pisa University (Italy)Verificeret mail på mail.dm.unipi.it
Yuri PirolaAssociate professor at DISCo, Univ. of Milano-BicoccaVerificeret mail på unimib.it
Nicola PrezzaCa' Foscari University of VeniceVerificeret mail på unive.it
Fatima VayaniKing's College LondonVerificeret mail på kcl.ac.uk
Andrea MarinoUniversity of FlorenceVerificeret mail på unifi.it
Rui FerreiraStaff Machine Learning Engineer, SpotifyVerificeret mail på spotify.com

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Nadia Pisanti

University of Pisa & Erable Team INRIA

Verificeret mail på di.unipi.it - Startside

Computational Biology Bioinformatics Algorithms


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Applied combinatorics on words M Lothaire Cambridge Univ Pr, 2005	632	2005
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015	402	2015
Computational pan-genomics: status, promises and challenges Briefings in Bioinformatics, 2016	369*	2016
WhatsHap: fast and accurate read-based phasing M Martin, M Patterson, S Garg, S O Fischer, N Pisanti, GW Klau, ... BioRxiv, 085050, 2016	328	2016
RISOTTO: Fast Extraction of Motifs with Mismatches N Pisanti, AM Carvalho, L Marsan, MF Sagot LATIN 2006: Theoretical Informatics: 7th Latin American Symposium, Valdivia …, 2006	137	2006
Optimal listing of cycles and st-paths in undirected graphs E Birmelé, R Ferreira, R Grossi, A Marino, N Pisanti, R Rizzi, G Sacomoto Proceedings of the twenty-fourth annual ACM-SIAM symposium on Discrete …, 2013	123	2013
Bases of motifs for generating repeated patterns with wild cards N Pisanti, M Crochemore, R Grossi, MF Sagot IEEE/ACM Transactions on Computational Biology and Bioinformatics 2 (1), 40-50, 2005	83	2005
HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016	58	2016
Identifying SNPs without a reference genome by comparing raw reads P Peterlongo, N Schnel, N Pisanti, MF Sagot, V Lacroix String Processing and Information Retrieval: 17th International Symposium …, 2010	58	2010
A basis of tiling motifs for generating repeated patterns and its complexity for higher quorum N Pisanti, M Crochemore, R Grossi, MF Sagot Mathematical Foundations of Computer Science 2003: 28th International …, 2003	48	2003
On-line pattern matching on similar texts R Grossi, CS Iliopoulos, C Liu, N Pisanti, SP Pissis, A Retha, G Rosone, ... Proceedings of 28th Annual Symposium on Combinatorial Pattern Matching (CPM …, 2017	43	2017
WhatsHap: Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L van Iersel, L Stougie, GW Klau, ... Research in Computational Molecular Biology: 18th Annual International …, 2014	43	2014
On the minimum error correction problem for haplotype assembly in diploid and polyploid genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology 23 (9), 718-736, 2016	41	2016
Even faster elastic-degenerate string matching via fast matrix multiplication G Bernardini, P Gawrychowski, N Pisanti, SP Pissis, G Rosone 46th International Colloquium on Automata, Languages, and Programming (ICALP …, 2019	37	2019
A first approach to finding common motifs with gaps CS Iliopoulos, J McHugh, P Peterlongo, N Pisanti, W Rytter, MF Sagot International Journal of Foundations of Computer Science 16 (06), 1145-1154, 2005	37	2005
Circular sequence comparison: algorithms and applications R Grossi, CS Iliopoulos, R Mercas, N Pisanti, SP Pissis, A Retha, F Vayani Algorithms for Molecular Biology 11, 1-14, 2016	36	2016
Lossless filter for multiple repetitions with Hamming distance P Peterlongo, N Pisanti, F Boyer, AP Do Lago, MF Sagot Journal of Discrete Algorithms 6 (3), 497-509, 2008	31	2008
SNPs detection by eBWT positional clustering N Prezza, N Pisanti, M Sciortino, G Rosone Algorithms for Molecular Biology 14, 1-13, 2019	30	2019
Lossless filter for multiple repeats with bounded edit distance P Peterlongo, GAT Sacomoto, AP Do Lago, N Pisanti, MF Sagot Algorithms for Molecular Biology 4, 1-20, 2009	29	2009
Approximate pattern matching on elastic-degenerate text G Bernardini, N Pisanti, SP Pissis, G Rosone Theoretical Computer Science 812, 109-122, 2020	27	2020

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