Jakob Skou Pedersen

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Morten Muhlig NielsenAssociate Professor of Bioinformatics, Aarhus University HospitalVerificeret mail på clin.au.dk
Lars DyrskjøtProfessor of Molecular Medicine, Aarhus UniversityVerificeret mail på clin.au.dk
David HausslerScientific Director, UC Santa Cruz Genomics Institute, University of California, Santa CruzVerificeret mail på soe.ucsc.edu
Claus Lindbjerg AndersenAarhus University and Aarhus University Hospital, Department of Molecular MedicineVerificeret mail på clin.au.dk
Adam SiepelSimons Center for Quantitative Biology, Cold Spring Harbor LaboratoryVerificeret mail på cshl.edu
W James KentUC Santa Cruz Genomics Institute, University of California Santa Cruz, UCSC Genome BrowserVerificeret mail på soe.ucsc.edu
Trine Line Hauge OkholmPhD student in BioinformaticsVerificeret mail på clin.au.dk
Anders H. LundBRIC, University of CopenhagenVerificeret mail på bric.ku.dk
Sofie SalamaProfessor of MCD Bio; Faculty Dir. of Diversity UCSC Genomics Inst.Verificeret mail på ucsc.edu
Katherine S PollardDirector, Gladstone Institute of Data Science & Biotechnology / UCSFVerificeret mail på gladstone.ucsf.edu
Asger HobolthProfessor, Department of Mathematics, Aarhus UniversityVerificeret mail på math.au.dk
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerificeret mail på snm.ku.dk
Ludovic OrlandoCentre for Anthropobiology & Genomics of Toulouse, CNRS/Univ Paul SabatierVerificeret mail på univ-tlse3.fr
Anders KroghDepartment of Computer Science and Center for Health Data Science, University of CopenhagenVerificeret mail på di.ku.dk

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Jakob Skou Pedersen

Professor at Department of Molecular Medicine, Aarhus University

Verificeret mail på ki.au.dk

Bioinformatics gene regulation cancer genomics probabilistic modelling


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project E Birney, JA Stamatoyannopoulos, A Dutta, R Guigó, TR Gingeras, ... Nature 447 (7146), 799-816, 2007	6113	2007
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes A Siepel, G Bejerano, JS Pedersen, AS Hinrichs, M Hou, K Rosenbloom, ... Genome research 15 (8), 1034-1050, 2005	4961	2005
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-218, 2007	2283	2007
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	2047*	2020
The UCSC genome browser database: update 2006 AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ... Nucleic acids research 34 (suppl 1), D590-D598, 2006	1560	2006
A high-resolution map of human evolutionary constraint using 29 mammals K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ... Nature 478 (7370), 476-482, 2011	1288	2011
An RNA gene expressed during cortical development evolved rapidly in humans KS Pollard, SR Salama, N Lambert, MA Lambot, S Coppens, JS Pedersen, ... Nature 443 (7108), 167-172, 2006	1195	2006
Ancient human genome sequence of an extinct Palaeo-Eskimo M Rasmussen, Y Li, S Lindgreen, JS Pedersen, A Albrechtsen, I Moltke, ... Nature 463 (7282), 757-762, 2010	1034	2010
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ... Nature 450 (7167), 219-232, 2007	723	2007
Identification and classification of conserved RNA secondary structures in the human genome JS Pedersen, G Bejerano, A Siepel, K Rosenbloom, K Lindblad-Toh, ... PLoS computational biology 2 (4), e33, 2006	673	2006
Comprehensive transcriptional analysis of early-stage urothelial carcinoma J Hedegaard, P Lamy, I Nordentoft, F Algaba, S Høyer, BP Ulhøi, S Vang, ... Cancer cell 30 (1), 27-42, 2016	644	2016
The UCSC genome browser database: 2008 update D Karolchik, RM Kuhn, R Baertsch, GP Barber, H Clawson, M Diekhans, ... Nucleic acids research 36 (suppl_1), D773-D779, 2007	599	2007
Forces shaping the fastest evolving regions in the human genome KS Pollard, SR Salama, B King, AD Kern, T Dreszer, S Katzman, A Siepel, ... PloS genetics 2 (10), e168, 2006	591	2006
Posttranscriptional crossregulation between Drosha and DGCR8 J Han, JS Pedersen, SC Kwon, CD Belair, YK Kim, KH Yeom, WY Yang, ... Cell 136 (1), 75, 2009	586	2009
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020	583	2020
Analysis of circulating tumour DNA to monitor disease burden following colorectal cancer surgery T Reinert, LV Schøler, R Thomsen, H Tobiasen, S Vang, I Nordentoft, ... Gut 65 (4), 625-634, 2016	552	2016
A dual program for translation regulation in cellular proliferation and differentiation H Gingold, D Tehler, NR Christoffersen, MM Nielsen, F Asmar, ... Cell 158 (6), 1281-1292, 2014	524	2014
Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue J Hedegaard, K Thorsen, MK Lund, AMK Hein, SJ Hamilton-Dutoit, ... PloS one 9 (5), e98187, 2014	402	2014
The UCSC genome browser database: update 2007 RM Kuhn, D Karolchik, AS Zweig, H Trumbower, DJ Thomas, ... Nucleic acids research 35 (suppl 1), D668-D673, 2007	351	2007
Cellular disposal of miR23b by RAB27-dependent exosome release is linked to acquisition of metastatic properties MS Ostenfeld, DK Jeppesen, JR Laurberg, AT Boysen, JB Bramsen, ... Cancer research 74 (20), 5758-5771, 2014	325	2014

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