Pascal Hingamp

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Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Senior ScientistVerificeret mail på ebi.ac.uk
John QuackenbushHarvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-FarberVerificeret mail på hsph.harvard.edu
Paul SpellmanUniversity of California Los AngelesVerificeret mail på mednet.ucla.edu
Alvis BrazmaEMBL Scientist EmeritusVerificeret mail på ebi.ac.uk
Gavin SherlockProfessor of Genetics, Stanford UniversityVerificeret mail på stanford.edu
Christian StoeckertReseach Professor of Genetics, University of PennsylvaniaVerificeret mail på upenn.edu
Hiroyuki OgataInstitute for Chemical Research, Kyoto UniversityVerificeret mail på kuicr.kyoto-u.ac.jp
Shinichi SunagawaETH Zurich; Swiss Institute of BioinformaticsVerificeret mail på ethz.ch
Silvia G. AcinasDepartment of Marine Biology and Oceanography; Institute of Marine Sciences (ICM)-CSICVerificeret mail på icm.csic.es
Peer BorkDirector of EMBL HeidelbergVerificeret mail på embl.de
Susumu GotoDatabase Center for Life Science, Research Organization of Information and SystemsVerificeret mail på dbcls.rois.ac.jp
Yosuke NishimuraCeBN, Japan Agency for Marine-Earth Science and TechnologyVerificeret mail på jamstec.go.jp
Ugis SarkansTechnical team leader, EMBL-EBIVerificeret mail på ebi.ac.uk
Jaak ViloProf. of Bioinformatics, Institute of Computer Science, University of Tartu, EstoniaVerificeret mail på ut.ee
Martin VingronMax-Planck-Institut für molekulare GenetikVerificeret mail på molgen.mpg.de
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerificeret mail på med.kuleuven.be
Gipsi Lima MendezU.NamurVerificeret mail på uclouvain.be
Karsenti EricSenior scientist EMBLVerificeret mail på embl.de
Olivier JaillonCEA - INSTITUT JACOB - GENOSCOPE - Genomique Metabolique. FR TARA OCEANS GOSEEVerificeret mail på genoscope.cns.fr
Fabrice NotStation Biologique de Roscoff - CNRSVerificeret mail på sb-roscoff.fr

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Pascal Hingamp

Associate Professor, Aix Marseille University, France

Verificeret mail på univ-amu.fr - Startside

bioinformatics metagenomics marine plankton ecology virology


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4967	2001
Structure and function of the global ocean microbiome S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ... Science 348 (6237), 1261359, 2015	2629	2015
Eukaryotic plankton diversity in the sunlit ocean C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ... Science 348 (6237), 1261605, 2015	1879	2015
Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016	788	2016
Marine DNA viral macro-and microdiversity from pole to pole AC Gregory, AA Zayed, N Conceição-Neto, B Temperton, B Bolduc, ... Cell 177 (5), 1109-1123. e14, 2019	736	2019
Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 1261498, 2015	735	2015
Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019	569	2019
A holistic approach to marine eco-systems biology E Karsenti, SG Acinas, P Bork, C Bowler, C De Vargas, J Raes, M Sullivan, ... PLoS biology 9 (10), e1001177, 2011	476	2011
Microbial abundance, activity and population genomic profiling with mOTUs2 A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ... Nature communications 10 (1), 1014, 2019	444	2019
Open science resources for the discovery and analysis of Tara Oceans data S Pesant, F Not, M Picheral, S Kandels-Lewis, N Le Bescot, G Gorsky, ... Scientific data 2 (1), 1-16, 2015	431	2015
Linking virus genomes with host taxonomy T Mihara, Y Nishimura, Y Shimizu, H Nishiyama, G Yoshikawa, H Uehara, ... Viruses 8 (3), 66, 2016	399	2016
Global trends in marine plankton diversity across kingdoms of life FM Ibarbalz, N Henry, MC Brandão, S Martini, G Busseni, H Byrne, ... Cell 179 (5), 1084-1097. e21, 2019	392	2019
Metagenomic 16S rDNA I llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities R Logares, S Sunagawa, G Salazar, FM Cornejo‐Castillo, I Ferrera, ... Environmental microbiology 16 (9), 2659-2671, 2014	392	2014
A global ocean atlas of eukaryotic genes Q Carradec, E Pelletier, C Da Silva, A Alberti, Y Seeleuthner, ... Nature communications 9 (1), 373, 2018	355	2018
Gene expression changes and community turnover differentially shape the global ocean metatranscriptome G Salazar, L Paoli, A Alberti, J Huerta-Cepas, HJ Ruscheweyh, M Cuenca, ... Cell 179 (5), 1068-1083. e21, 2019	345	2019
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes P Hingamp, N Grimsley, SG Acinas, C Clerissi, L Subirana, J Poulain, ... The ISME journal 7 (9), 1678-1695, 2013	243	2013
QDD version 3.1: A user‐friendly computer program for microsatellite selection and primer design revisited: Experimental validation of variables determining genotyping success rate E Meglécz, N Pech, A Gilles, V Dubut, P Hingamp, A Trilles, R Grenier, ... Molecular ecology resources 14 (6), 1302-1313, 2014	229	2014
The EMBL nucleotide sequence database W Baker, A van den Broek, E Camon, P Hingamp, P Sterk, G Stoesser, ... Nucleic acids research 28 (1), 19-23, 2000	226	2000
Standards for microarray data CA Ball, G Sherlock, H Parkinson, P Rocca-Sera, C Brooksbank, ... Science 298 (5593), 539-539, 2002	217	2002
Environmental characteristics of Agulhas rings affect interocean plankton transport E Villar, GK Farrant, M Follows, L Garczarek, S Speich, S Audic, L Bittner, ... Science 348 (6237), 1261447, 2015	203	2015

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