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Mark Diekhans
Mark Diekhans
University of California, Santa Cruz; UC Santa Cruz Genomics Institute
Verificeret mail på soe.ucsc.edu
Titel
Citeret af
Citeret af
År
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
174802012
Initial sequencing and comparative analysis of the mouse genome
European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ...
Nature 420 (6915), 520-562, 2002
87762002
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
54232012
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
29672019
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
25802022
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
20972021
Using native and syntenically mapped cDNA alignments to improve de novo gene finding
M Stanke, M Diekhans, R Baertsch, D Haussler
Bioinformatics 24 (5), 637-644, 2008
20422008
The UCSC genome browser database
D Karolchik, R Baertsch, M Diekhans, TS Furey, A Hinrichs, YT Lu, ...
Nucleic acids research 31 (1), 51-54, 2003
19012003
The UCSC genome browser database: update 2006
AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ...
Nucleic acids research 34 (suppl_1), D590-D598, 2006
15632006
The UCSC genome browser database: update 2011
PA Fujita, B Rhead, AS Zweig, AS Hinrichs, D Karolchik, MS Cline, ...
Nucleic acids research 39 (suppl_1), D876-D882, 2010
12962010
The UCSC genome browser database: 2015 update
KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ...
Nucleic acids research 43 (D1), D670-D681, 2015
11022015
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
10742021
ENCODE data in the UCSC Genome Browser: year 5 update
KR Rosenbloom, CA Sloan, VS Malladi, TR Dreszer, K Learned, ...
Nucleic acids research 41 (D1), D56-D63, 2012
9142012
The UCSC Genome Browser database: extensions and updates 2013
LR Meyer, AS Zweig, AS Hinrichs, D Karolchik, RM Kuhn, M Wong, ...
Nucleic acids research 41 (D1), D64-D69, 2012
9102012
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
DS Gerhard, L Wagner, EA Feingold, CM Shenmen, LH Grouse, ...
Genome research 14 (10B), 2121-2127, 2004
8392004
The UCSC genome browser database: 2019 update
M Haeussler, AS Zweig, C Tyner, ML Speir, KR Rosenbloom, BJ Raney, ...
Nucleic acids research 47 (D1), D853-D858, 2019
8142019
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
Human molecular genetics 23 (22), 5866-5878, 2014
8012014
The UCSC genome browser database: 2014 update
D Karolchik, GP Barber, J Casper, H Clawson, MS Cline, M Diekhans, ...
Nucleic acids research 42 (D1), D764-D770, 2014
7802014
The UCSC genome browser database: update 2010
B Rhead, D Karolchik, RM Kuhn, AS Hinrichs, AS Zweig, PA Fujita, ...
Nucleic acids research 38 (suppl_1), D613-D619, 2010
7532010
A discriminative framework for detecting remote protein homologies
T Jaakkola, M Diekhans, D Haussler
Journal of computational biology 7 (1-2), 95-114, 2000
7042000
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Artikler 1–20