Chromatin accessibility and the regulatory epigenome SL Klemm, Z Shipony, WJ Greenleaf Nature Reviews Genetics 20 (4), 207-220, 2019 | 1603 | 2019 |
Derivation of novel human ground state naive pluripotent stem cells O Gafni, L Weinberger, AAF Mansour, YS Manor, E Chomsky, ... Nature 504 (7479), 282-286, 2013 | 1244 | 2013 |
Deterministic direct reprogramming of somatic cells to pluripotency Y Rais, A Zviran, S Geula, O Gafni, E Chomsky, S Viukov, AAF Mansour, ... Nature 502 (7469), 65-70, 2013 | 649 | 2013 |
DC mobilization from the skin requires docking to immobilized CCL21 on lymphatic endothelium and intralymphatic crawling O Tal, HY Lim, I Gurevich, I Milo, Z Shipony, LG Ng, V Angeli, G Shakhar Journal of Experimental Medicine 208 (10), 2141-2153, 2011 | 310 | 2011 |
Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells Z Shipony, Z Mukamel, NM Cohen, G Landan, E Chomsky, SR Zeliger, ... Nature 513 (7516), 115-119, 2014 | 205 | 2014 |
p53 is a central regulator driving neurodegeneration caused by C9orf72 poly (PR) M Maor-Nof, Z Shipony, R Lopez-Gonzalez, L Nakayama, YJ Zhang, ... Cell 184 (3), 689-708. e20, 2021 | 141 | 2021 |
Long-range single-molecule mapping of chromatin accessibility in eukaryotes Z Shipony, GK Marinov, MP Swaffer, NA Sinnott-Armstrong, JM Skotheim, ... Nature methods 17 (3), 319-327, 2020 | 123 | 2020 |
Aging disrupts circadian gene regulation and function in macrophages E Blacher, C Tsai, L Litichevskiy, Z Shipony, CA Iweka, KM Schneider, ... Nature immunology 23 (2), 229-236, 2022 | 111 | 2022 |
p53 is essential for DNA methylation homeostasis in naive embryonic stem cells, and its loss promotes clonal heterogeneity A Tovy, A Spiro, R McCarthy, Z Shipony, Y Aylon, K Allton, E Ainbinder, ... Genes & development 31 (10), 959-972, 2017 | 71 | 2017 |
Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters D Zeevi, E Sharon, M Lotan-Pompan, Y Lubling, Z Shipony, ... Genome research 21 (12), 2114-2128, 2011 | 63 | 2011 |
Loss of the neural-specific BAF subunit ACTL6B relieves repression of early response genes and causes recessive autism W Wenderski, L Wang, A Krokhotin, JJ Walsh, H Li, H Shoji, S Ghosh, ... Proceedings of the National Academy of Sciences 117 (18), 10055-10066, 2020 | 48 | 2020 |
Integrated single-cell transcriptomics and epigenomics reveals strong germinal center–associated etiology of autoimmune risk loci HW King, KL Wells, Z Shipony, AS Kathiria, LE Wagar, C Lareau, N Orban, ... Science immunology 6 (64), eabh3768, 2021 | 39 | 2021 |
Increased ACTL6A occupancy within mSWI/SNF chromatin remodelers drives human squamous cell carcinoma CY Chang, Z Shipony, SG Lin, A Kuo, X Xiong, KM Loh, WJ Greenleaf, ... Molecular cell 81 (24), 4964-4978. e8, 2021 | 33 | 2021 |
Reduced CTL motility and activity in avascular tumor areas Y Manaster, Z Shipony, A Hutzler, M Kolesnikov, C Avivi, B Shalmon, ... Cancer Immunology, Immunotherapy 68, 1287-1301, 2019 | 24 | 2019 |
Interrogating the accessible chromatin landscape of eukaryote genomes using ATAC-seq GK Marinov, Z Shipony Deep Sequencing Data Analysis, 183-226, 2021 | 20 | 2021 |
Genome-wide mapping of active regulatory elements using ATAC-seq GK Marinov, Z Shipony, A Kundaje, WJ Greenleaf Chromatin Accessibility: Methods and Protocols, 3-19, 2022 | 4 | 2022 |
Ultra high-throughput whole-genome methylation sequencing reveals trajectories in precancerous polyps to early colorectal adenocarcinoma H Lee, G Krieger, T Clark, A Khan, CR Hanson, Y Zhu, N Bararpour, ... bioRxiv, 2022.05. 30.494076, 2022 | 4 | 2022 |
Corrigendum: Deterministic direct reprogramming of somatic cells to pluripotency Y Rais, A Zviran, S Geula, O Gafni, E Chomsky, S Viukov, AAF Mansour, ... Nature 520 (7549), 710-710, 2015 | 4 | 2015 |
S103: NATURAL AND AGE-RELATED VARIATION IN CIRCULATING HUMAN HEMATOPOIETIC STEM CELLS N Furer, N Rappoport, A Tanay, L Shlush HemaSphere 7 (S3), e6115724, 2023 | 3 | 2023 |
Simultaneous single-cell profiling of the transcriptome and accessible chromatin using share-seq SH Kim, GK Marinov, ST Bagdatli, SI Higashino, Z Shipony, A Kundaje, ... Chromatin Accessibility: Methods and Protocols, 187-230, 2022 | 3 | 2022 |