Integrated single-cell transcriptome analysis reveals heterogeneity of esophageal squamous cell carcinoma microenvironment HQ Dinh, F Pan, G Wang, QF Huang, CE Olingy, ZY Wu, SH Wang, X Xu, ... Nature communications 12 (1), 7335, 2021 | 124 | 2021 |
Interplay and cooperation between SREBF1 and master transcription factors regulate lipid metabolism and tumor-promoting pathways in squamous cancer LY Li, Q Yang, YY Jiang, W Yang, Y Jiang, X Li, M Hazawa, B Zhou, ... Nature communications 12 (1), 4362, 2021 | 86 | 2021 |
Master transcription factors form interconnected circuitry and orchestrate transcriptional networks in oesophageal adenocarcinoma L Chen, M Huang, J Plummer, J Pan, YY Jiang, Q Yang, TC Silva, N Gull, ... Gut 69 (4), 630-640, 2020 | 78 | 2020 |
A transcriptional regulatory loop of master regulator transcription factors, PPARG, and fatty acid synthesis promotes esophageal adenocarcinoma S Ma, B Zhou, Q Yang, Y Pan, W Yang, SJ Freedland, LW Ding, ... Cancer research 81 (5), 1216-1229, 2021 | 63 | 2021 |
Systematical analysis of lncRNA–mRNA competing endogenous RNA network in breast cancer subtypes S Zhou, L Wang, Q Yang, H Liu, Q Meng, L Jiang, S Wang, W Jiang Breast cancer research and treatment 169, 267-275, 2018 | 59 | 2018 |
Lineage-specific epigenomic and genomic activation of oncogene HNF4A promotes gastrointestinal adenocarcinomas J Pan, TC Silva, N Gull, Q Yang, JT Plummer, S Chen, K Daigo, ... Cancer research 80 (13), 2722-2736, 2020 | 52 | 2020 |
The gain and loss of long noncoding RNA associated-competing endogenous RNAs in prostate cancer D Liu, X Yu, S Wang, E Dai, L Jiang, J Wang, Q Yang, F Yang, S Zhou, ... Oncotarget 7 (35), 57228, 2016 | 47 | 2016 |
Pathway enrichment analysis approach based on topological structure and updated annotation of pathway Q Yang, S Wang, E Dai, S Zhou, D Liu, H Liu, Q Meng, B Jiang, W Jiang Briefings in bioinformatics 20 (1), 168-177, 2019 | 40 | 2019 |
D-lnc: a comprehensive database and analytical platform to dissect the modification of drugs on lncRNA expression W Jiang, Y Qu, Q Yang, X Ma, Q Meng, J Xu, X Liu, S Wang RNA biology 16 (11), 1586-1591, 2019 | 35 | 2019 |
A pan-cancer analysis of CpG Island gene regulation reveals extensive plasticity within Polycomb target genes Y Zheng, G Huang, TC Silva, Q Yang, YY Jiang, HP Koeffler, DC Lin, ... Nature communications 12 (1), 2485, 2021 | 30 | 2021 |
Identification of key genes by integrating DNA methylation and next-generation transcriptome sequencing for esophageal squamous cell carcinoma Y Chen, LD Liao, ZY Wu, Q Yang, JC Guo, JZ He, SH Wang, XE Xu, ... Aging (Albany NY) 12 (2), 1332, 2020 | 21 | 2020 |
The histone deacetylase inhibitor panobinostat exerts anticancer effects on esophageal squamous cell carcinoma cells by inducing cell cycle arrest YW Cheng, LD Liao, Q Yang, Y Chen, PJ Nie, XJ Zhang, JJ Xie, BE Shan, ... Cell biochemistry and function 36 (8), 398-407, 2018 | 21 | 2018 |
Activation of bivalent factor DLX5 cooperates with master regulator TP63 to promote squamous cell carcinoma Y Huang, Q Yang, Y Zheng, L Lin, X Xu, XE Xu, TC Silva, M Hazawa, ... Nucleic Acids Research 49 (16), 9246-9263, 2021 | 17 | 2021 |
Long read single-molecule real-time sequencing elucidates transcriptome-wide heterogeneity and complexity in esophageal squamous cells YW Cheng, YM Chen, QQ Zhao, X Zhao, YR Wu, DZ Chen, LD Liao, ... Frontiers in Genetics 10, 915, 2019 | 14 | 2019 |
Dietary riboflavin deficiency promotes N-nitrosomethylbenzylamine-induced esophageal tumorigenesis in rats by inducing chronic inflammation F Pan, Y Chen, JZ He, L Long, Y Chen, HJ Luo, YW Xu, XX Pang, Q Yang, ... American journal of cancer research 9 (11), 2469, 2019 | 14 | 2019 |
Potential mechanism of immune evasion associated with the master regulator ASCL2 in microsatellite stability in colorectal cancer Q Yang, G Huang, L Li, E Li, L Xu Journal of Immunology Research 2021 (1), 5964752, 2021 | 10 | 2021 |
ONECUT2 acts as a lineage plasticity driver in adenocarcinoma as well as neuroendocrine variants of prostate cancer C Qian, Q Yang, M Rotinen, R Huang, H Kim, B Gallent, Y Yan, ... Nucleic acids research 52 (13), 7740-7760, 2024 | 7 | 2024 |
Fatty Acid Signaling Impacts Prostate Cancer Lineage Plasticity in an Autocrine and Paracrine Manner L Zhang, S Billet, G Gonzales, K Rohena-Rivera, H Muranaka, GCY Chu, ... Cancers 14 (14), 3449, 2022 | 5 | 2022 |
Activation of ONECUT2 by RB1 loss in castration-resistant prostate cancer C Qian, Q Yang, SJ Freedland, D Di Vizio, L Ellis, S You, MR Freeman American Journal of Clinical and Experimental Urology 10 (6), 397, 2022 | 5 | 2022 |
Epigenomic analyses identify FOXM1 as a key regulator of anti-tumor immune response in esophageal adenocarcinoma B Ziman, Q Yang, Y Zheng, M Sheth, C Nam, H Zhao, L Zhang, B Hu, ... Cell Death & Disease 15 (2), 152, 2024 | 4 | 2024 |