| Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system V Somerville, S Lutz, M Schmid, D Frei, A Moser, S Irmler, JE Frey, ... BMC microbiology 19, 1-18, 2019 | 124 | 2019 |
| Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast Metschnikowia pulcherrima D Gore‐Lloyd, I Sumann, AO Brachmann, K Schneeberger, ... Molecular microbiology 112 (1), 317-332, 2019 | 85 | 2019 |
| Comparative Genomics of Completely Sequenced Lactobacillus helveticus Genomes Provides Insights into Strain-Specific Genes and Resolves Metagenomics … M Schmid, J Muri, D Melidis, AR Varadarajan, V Somerville, A Wicki, ... Frontiers in microbiology 9, 63, 2018 | 53 | 2018 |
| Petunia-and Arabidopsis-specific root microbiota responses to phosphate supplementation N Bodenhausen, V Somerville, A Desiro, JC Walser, L Borghi, ... Phytobiomes journal 3 (2), 112-124, 2019 | 43 | 2019 |
| Functional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures V Somerville, H Berthoud, RS Schmidt, HP Bachmann, YH Meng, ... The ISME Journal 16 (2), 388-399, 2022 | 39 | 2022 |
| An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1 AR Varadarajan, RN Allan, JDP Valentin, OE Castañeda Ocampo, ... npj Biofilms and Microbiomes 6 (1), 46, 2020 | 36 | 2020 |
| Use and limitations of genome-scale metabolic models in food microbiology V Somerville, P Grigaitis, J Battjes, F Moro, B Teusink Current Opinion in Food Science 43, 225-231, 2022 | 20 | 2022 |
| Deep divergence and genomic diversification of gut symbionts of neotropical stingless bees G Sarton-Lohéac, CG Nunes da Silva, F Mazel, G Baud, V de Bakker, ... MBio 14 (2), e03538-22, 2023 | 16 | 2023 |
| DNA methylation patterns in the round goby hypothalamus support an on-the-spot decision scenario for territorial behavior V Somerville, M Schwaiger, PE Hirsch, JC Walser, K Bussmann, ... Genes 10 (3), 219, 2019 | 13 | 2019 |
| Extensive diversity and rapid turnover of phage defense repertoires in cheese-associated bacterial communities V Somerville, T Schowing, H Chabas, RS Schmidt, U von Ah, ... Microbiome 10 (1), 137, 2022 | 10 | 2022 |
| Petunia-and Arabidopsis-specific root microbiota responses to phosphate supplementation. Phytobiomes J 3: 112–124 N Bodenhausen, V Somerville, A Desirò, JC Walser, L Borghi, ... | 5 | 2019 |
| An integrated model system to gain mechanistic insights into biofilm formation and antimicrobial resistance development in Pseudomonas aeruginosa MPAO1 AR Varadarajan, RN Allan, JDP Valentin, OE Castañeda Ocampo, ... bioRxiv, 2020.02. 06.936690, 2020 | 4 | 2020 |
| Fermentation practices select for thermostable endolysins in phages F Oechslin, X Zhu, C Morency, V Somerville, R Shi, S Moineau Molecular Biology and Evolution 41 (3), msae055, 2024 | 3 | 2024 |
| Species-specific root microbiota dynamics in response to plant-available phosphorus N Bodenhausen, V Somerville, A Desirò, JC Walser, L Borghi, ... bioRxiv, 400119, 2018 | 3 | 2018 |
| Dairy phages escape CRISPR defence of Streptococcus thermophilus via the anti-CRISPR AcrIIA3 A Pastuszka, GM Rousseau, V Somerville, S Levesque, JP Fiset, A Goulet, ... International Journal of Food Microbiology 407, 110414, 2023 | 2 | 2023 |
| Genomic and phenotypic imprints of microbial domestication on cheese starter cultures V Somerville, N Thierer, RS Schmidt, A Roetschi, L Braillard, M Haueter, ... Nature communications 15 (1), 8642, 2024 | 1 | 2024 |
| Viral niche-partitioning: comparative genomics of giant viruses across environmental gradients in a high Arctic freshwater-saltwater lake TM Pitot, C Girard, JZ Rapp, V Somerville, AI Culley, WF Vincent, ... ISME communications 5 (1), ycae155, 2025 | | 2025 |
| Cheese reveals variety of ways bacteria ward off viral infection V Somerville, T Schowing, H Chabas, RS Schmidt, U von Ah, ... | | 2023 |
| Dairy practices select for thermostable endolysins in phages F Oechslin, X Zhu, C Morency, V Somerville, R Shi, S Moineau bioRxiv, 2023.09. 27.559745, 2023 | | 2023 |
| Taxonomic and Functional Diversity of Swiss Cheese Starter Cultures V Somerville éditeur non identifié, 2022 | | 2022 |