| Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing M Sun, D Huang, A Zhang, I Khan, H Yan, X Wang, X Zhang, J Zhang, ... BMC Plant Biology 20, 1-15, 2020 | 123 | 2020 |
| DeepTE: a computational method for de novo classification of transposons with convolutional neural network SL Haidong Yan, Aureliano Bombarely Bioinformatics 36 (15), 4269–4275, 2020 | 103 | 2020 |
| Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet H Yan, M Sun, Z Zhang, Y Jin, A Zhang, C Lin, B Wu, M He, B Xu, J Wang, ... Nature Genetics 55 (3), 507-518, 2023 | 102 | 2023 |
| Identification of candidate reference genes in perennial ryegrass for quantitative RT-PCR under various abiotic stress conditions L Huang, H Yan, X Jiang, G Yin, X Zhang, X Qi, Y Zhang, Y Yan, X Ma, ... PloS one 9 (4), e93724, 2014 | 97 | 2014 |
| Transposon activation is a major driver in the genome evolution of cultivated olive trees (Olea europaea L.) J Jiménez‐Ruiz, JA Ramírez‐Tejero, N Fernández‐Pozo, ... The Plant Genome 13 (1), e20010, 2020 | 81 | 2020 |
| Genome assembly provides insights into the genome evolution and flowering regulation of orchardgrass L Huang, G Feng, H Yan, Z Zhang, BS Bushman, J Wang, A Bombarely, ... Plant Biotechnology Journal 18 (2), 373-388, 2020 | 71 | 2020 |
| Whole-Genome Resequencing of Seven Eggplant (Solanum melongena) and One Wild Relative (S. incanum) Accessions Provides New Insights and Breeding … P Gramazio, H Yan, T Hasing, S Vilanova, J Prohens, A Bombarely Frontiers in plant science 10, 1220, 2019 | 63 | 2019 |
| Evaluation of candidate reference genes for normalization of quantitative RT-PCR in switchgrass under various abiotic stress conditions L Huang, H Yan, X Jiang, X Zhang, Y Zhang, X Huang, Y Zhang, J Miao, ... BioEnergy Research 7, 1201-1211, 2014 | 52 | 2014 |
| Reference gene selection for quantitative real-time reverse-transcriptase PCR in orchardgrass subjected to various abiotic stresses L Huang, H Yan, X Jiang, Y Zhang, X Zhang, Y Ji, B Zeng, B Xu, G Yin, ... Gene 553 (2), 158-165, 2014 | 49 | 2014 |
| The ‘Tommy Atkins’ mango genome reveals candidate genes for fruit quality Mango Genome Consortium, ISE Bally, A Bombarely, AH Chambers, ... BMC plant biology 21, 1-18, 2021 | 46 | 2021 |
| Identifying differentially expressed genes under heat stress and developing molecular markers in orchardgrass (Dactylis glomerata L.) through transcriptome analysis LK Huang, HD Yan, XX Zhao, XQ Zhang, J Wang, T Frazier, G Yin, ... Molecular ecology resources 15 (6), 1497-1509, 2015 | 44 | 2015 |
| Genetic Diversity and Association of EST-SSR and SCoT Markers with Rust Traits in Orchardgrass (Dactylis glomerata L.) H Yan, Y Zhang, B Zeng, G Yin, X Zhang, Y Ji, L Huang, X Jiang, X Liu, ... Molecules 21 (1), 66, 2016 | 43 | 2016 |
| Genome survey sequencing of purple elephant grass (Pennisetum purpureum Schum ‘Zise’) and identification of its SSR markers C Wang, H Yan, J Li, S Zhou, T Liu, X Zhang, L Huang Molecular Breeding 38, 1-10, 2018 | 41 | 2018 |
| Reference Gene Selection for Quantitative Real-Time Reverse-Transcriptase PCR in Annual Ryegrass (Lolium multiflorum) Subjected to Various Abiotic Stresses Q Liu, X Qi, H Yan, L Huang, G Nie, X Zhang Molecules 23 (1), 172, 2018 | 40 | 2018 |
| Integrative analysis of metabolome and transcriptome reveals anthocyanins biosynthesis regulation in grass species Pennisetum purpureum S Zhou, J Chen, Y Lai, G Yin, P Chen, KK Pennerman, H Yan, B Wu, ... Industrial Crops and Products 138, 111470, 2019 | 37 | 2019 |
| Milletdb: a multi‐omics database to accelerate the research of functional genomics and molecular breeding of millets M Sun, H Yan, A Zhang, Y Jin, C Lin, L Luo, B Wu, Y Fan, S Tian, X Cao, ... Plant biotechnology journal 21 (11), 2348-2357, 2023 | 36 | 2023 |
| Phylogenetic Relationships in the Festuca-Lolium Complex (Loliinae; Poaceae): New Insights from Chloroplast Sequences Y Cheng, K Zhou, MW Humphreys, JA Harper, X Ma, X Zhang, H Yan, ... Frontiers in Ecology and Evolution 4, 89, 2016 | 36 | 2016 |
| De novo Transcriptome Analysis and Molecular Marker Development of Two Hemarthria Species X Huang, HD Yan, XQ Zhang, J Zhang, TP Frazier, DJ Huang, L Lu, ... Frontiers in Plant Science 7, 496, 2016 | 36 | 2016 |
| Genetic variation, population structure and linkage disequilibrium in Switchgrass with ISSR, SCoT and EST-SSR markers Y Zhang, H Yan, X Jiang, X Wang, L Huang, B Xu, X Zhang, L Zhang Hereditas 153, 1-12, 2016 | 35 | 2016 |
| The first Illumina-based de novo transcriptome analysis and molecular marker development in Napier grass (Pennisetum purpureum) S Zhou, C Wang, TP Frazier, H Yan, P Chen, Z Chen, L Huang, X Zhang, ... Molecular breeding 38, 1-14, 2018 | 31 | 2018 |
