| xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data K Uppal, QA Soltow, FH Strobel, WS Pittard, KM Gernert, T Yu, DP Jones BMC bioinformatics 14, 1-12, 2013 | 327 | 2013 |
| xMSannotator: an R package for network-based annotation of high-resolution metabolomics data K Uppal, DI Walker, DP Jones Analytical chemistry 89 (2), 1063-1067, 2017 | 262 | 2017 |
| Computational metabolomics: a framework for the million metabolome K Uppal, DI Walker, K Liu, S Li, YM Go, DP Jones Chemical research in toxicology 29 (12), 1956-1975, 2016 | 240 | 2016 |
| The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes MN McCall, K Uppal, HA Jaffee, MJ Zilliox, RA Irizarry Nucleic acids research 39 (suppl_1), D1011-D1015, 2011 | 218 | 2011 |
| Molecular transducers of physical activity consortium (MoTrPAC): mapping the dynamic responses to exercise JA Sanford, CD Nogiec, ME Lindholm, JN Adkins, D Amar, S Dasari, ... Cell 181 (7), 1464-1474, 2020 | 217 | 2020 |
| Reference standardization for mass spectrometry and high-resolution metabolomics applications to exposome research YM Go, DI Walker, Y Liang, K Uppal, QA Soltow, VL Tran, F Strobel, ... Toxicological sciences 148 (2), 531-543, 2015 | 215 | 2015 |
| Plasma metabolomics in human pulmonary tuberculosis disease: a pilot study JK Frediani, DP Jones, N Tukvadze, K Uppal, E Sanikidze, M Kipiani, ... PloS one 9 (10), e108854, 2014 | 159 | 2014 |
| xMWAS: a data-driven integration and differential network analysis tool K Uppal, C Ma, YM Go, DP Jones Bioinformatics 34 (4), 701-702, 2018 | 145 | 2018 |
| Serum metabolomics of slow vs. rapid motor progression Parkinson’s disease: a pilot study JR Roede, K Uppal, Y Park, K Lee, V Tran, D Walker, FH Strobel, ... PloS one 8 (10), e77629, 2013 | 143 | 2013 |
| Reference standardization for quantification and harmonization of large-scale metabolomics KH Liu, M Nellis, K Uppal, C Ma, VL Tran, Y Liang, DI Walker, DP Jones Analytical chemistry 92 (13), 8836-8844, 2020 | 142 | 2020 |
| Metabolome-wide association study of neovascular age-related macular degeneration MP Osborn, Y Park, MB Parks, LG Burgess, K Uppal, K Lee, DP Jones, ... PloS one 8 (8), e72737, 2013 | 133 | 2013 |
| High-resolution mapping of h1 linker histone variants in embryonic stem cells K Cao, N Lailler, Y Zhang, A Kumar, K Uppal, Z Liu, EK Lee, H Wu, ... PLoS genetics 9 (4), e1003417, 2013 | 132 | 2013 |
| Prenatal exposure to perfluoroalkyl substances associated with increased susceptibility to liver injury in children N Stratakis, DV Conti, R Jin, K Margetaki, D Valvi, AP Siskos, L Maitre, ... Hepatology 72 (5), 1758-1770, 2020 | 125 | 2020 |
| Metabolic pathways of lung inflammation revealed by high-resolution metabolomics (HRM) of H1N1 influenza virus infection in mice JD Chandler, X Hu, EJ Ko, S Park, YT Lee, M Orr, J Fernandes, K Uppal, ... American Journal of Physiology-Regulatory, Integrative and Comparative …, 2016 | 113 | 2016 |
| High-resolution metabolomics of occupational exposure to trichloroethylene DI Walker, K Uppal, L Zhang, R Vermeulen, M Smith, W Hu, MP Purdue, ... International journal of epidemiology 45 (5), 1517-1527, 2016 | 107 | 2016 |
| Correlation of the lung microbiota with metabolic profiles in bronchoalveolar lavage fluid in HIV infection SK Cribbs, K Uppal, S Li, DP Jones, L Huang, L Tipton, A Fitch, ... Microbiome 4, 1-11, 2016 | 102 | 2016 |
| Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome G Inak, A Rybak-Wolf, P Lisowski, TM Pentimalli, R Jüttner, P Glažar, ... Nature Communications 12 (1), 1929, 2021 | 100 | 2021 |
| Metabolomics of ADSOL (AS-1) red blood cell storage JD Roback, CD Josephson, EK Waller, JL Newman, S Karatela, K Uppal, ... Transfusion medicine reviews 28 (2), 41-55, 2014 | 99 | 2014 |
| Western diet induces colonic nitrergic myenteric neuropathy and dysmotility in mice via saturated fatty acid‐and lipopolysaccharide‐induced TLR4 signalling F Reichardt, B Chassaing, BG Nezami, G Li, S Tabatabavakili, S Mwangi, ... The Journal of Physiology 595 (5), 1831-1846, 2017 | 94 | 2017 |
| Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma D Liang, CN Ladva, R Golan, T Yu, DI Walker, SE Sarnat, R Greenwald, ... Environment international 127, 503-513, 2019 | 92 | 2019 |
