| Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012 | 10895 | 2012 |
| A framework for human microbiome research nature 486 (7402), 215-221, 2012 | 2506 | 2012 |
| Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ... Nature 569 (7758), 655-662, 2019 | 2358 | 2019 |
| Disease Ontology: a backbone for disease semantic integration LM Schriml, C Arze, S Nadendla, YWW Chang, M Mazaitis, V Felix, ... Nucleic acids research 40 (D1), D940-D946, 2012 | 1109 | 2012 |
| Structure, function and diversity of the healthy human microbiome HMP Consortium nature 486 (7402), 207-214, 2012 | 667 | 2012 |
| Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data WA Kibbe, C Arze, V Felix, E Mitraka, E Bolton, G Fu, CJ Mungall, ... Nucleic acids research 43 (D1), D1071-D1078, 2015 | 641 | 2015 |
| Independent Emergence of Artemisinin Resistance Mutations Among Plasmodium falciparum in Southeast Asia S Takala-Harrison, CG Jacob, C Arze, MP Cummings, JC Silva, ... The Journal of infectious diseases 211 (5), 670-679, 2015 | 479 | 2015 |
| CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing SV Angiuoli, M Matalka, A Gussman, K Galens, M Vangala, DR Riley, ... BMC bioinformatics 12, 1-15, 2011 | 375 | 2011 |
| Genetic loci associated with delayed clearance of Plasmodium falciparum following artemisinin treatment in Southeast Asia S Takala-Harrison, TG Clark, CG Jacob, MP Cummings, O Miotto, ... Proceedings of the National Academy of Sciences 110 (1), 240-245, 2013 | 355 | 2013 |
| Polymorphisms in Plasmodium falciparum chloroquine resistance transporter and multidrug resistance 1 genes: parasite risk factors that affect treatment outcomes for P … M Venkatesan, NB Gadalla, K Stepniewska, P Dahal, C Nsanzabana, ... The American journal of tropical medicine and hygiene 91 (4), 833, 2014 | 302 | 2014 |
| Association between sulfur-metabolizing bacterial communities in stool and risk of distal colorectal cancer in men LH Nguyen, W Ma, DD Wang, Y Cao, H Mallick, TK Gerbaba, ... Gastroenterology 158 (5), 1313-1325, 2020 | 137 | 2020 |
| Allelic variation contributes to bacterial host specificity M Yue, X Han, LD Masi, C Zhu, X Ma, J Zhang, R Wu, R Schmieder, ... Nature Communications 6 (1), 8754, 2015 | 103 | 2015 |
| Global genome analysis reveals a vast and dynamic anellovirus landscape within the human virome CA Arze, S Springer, G Dudas, S Patel, A Bhattacharyya, H Swaminathan, ... Cell Host & Microbe 29 (8), 1305-1315. e6, 2021 | 83 | 2021 |
| Discovery of bioactive microbial gene products in inflammatory bowel disease Y Zhang, A Bhosle, S Bae, LJ McIver, G Pishchany, EK Accorsi, ... Nature 606 (7915), 754-760, 2022 | 66 | 2022 |
| A new method for estimating species age supports the coexistence of malaria parasites and their mammalian hosts JC Silva, A Egan, C Arze, JL Spouge, DG Harris Molecular biology and evolution 32 (5), 1354-1364, 2015 | 54 | 2015 |
| GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database LM Schriml, C Arze, S Nadendla, A Ganapathy, V Felix, A Mahurkar, ... Nucleic acids research 38 (suppl_1), D754-D764, 2010 | 40 | 2010 |
| Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation D Podlesny, C Arze, E Dörner, S Verma, S Dutta, J Walter, WF Fricke Microbiome 10 (1), 53, 2022 | 38 | 2022 |
| Bacterial microbiota diversity and composition in red and white wines correlate with plant-derived DNA contributions and botrytis infection AM Bubeck, L Preiss, A Jung, E Dörner, D Podlesny, M Kulis, C Maddox, ... Scientific reports 10 (1), 13828, 2020 | 24 | 2020 |
| Comprehensive profiling of antibody responses to the human anellome using programmable phage display T Venkataraman, H Swaminathan, CA Arze, SM Jacobo, A Bhattacharyya, ... Cell Reports 41 (12), 2022 | 22 | 2022 |
| CloVR-16S: Phylogenetic microbial community composition analysis based on 16S ribosomal RNA amplicon sequencing–standard operating procedure, version 1.0 WF Fricke, J White, C Arze, M Matalka, TCVR Team, O White, S Angiuoli Nature Precedings, 1-1, 2011 | 20 | 2011 |
