| Genetic analysis of the human microglial transcriptome across brain regions, aging and disease pathologies KP Lopes, GJL Snijders, J Humphrey, A Allan, MAM Sneeboer, E Navarro, ... Nature genetics 54 (1), 4-17, 2022 | 180 | 2022 |
| Alignment modulates ancestral sequence reconstruction accuracy RA Vialle, AU Tamuri, N Goldman Molecular biology and evolution 35 (7), 1783-1797, 2018 | 77 | 2018 |
| Integrating whole-genome sequencing with multi-omic data reveals the impact of structural variants on gene regulation in the human brain RA Vialle, K de Paiva Lopes, DA Bennett, JF Crary, T Raj Nature Neuroscience 25 (4), 504-514, 2022 | 50 | 2022 |
| Whole genome sequencing of the Pirarucu (Arapaima gigas) supports independent emergence of major teleost clades RA Vialle, JES de Souza, K de Paiva Lopes, DG Teixeira, ... Genome Biology and Evolution, 2018 | 41 | 2018 |
| Dysregulation of mitochondrial and proteolysosomal genes in Parkinson’s disease myeloid cells E Navarro, E Udine, KP Lopes, M Parks, G Riboldi, BM Schilder, ... Nature Aging 1 (9), 850-863, 2021 | 30 | 2021 |
| Genome-wide association study and functional validation implicates JADE1 in tauopathy K Farrell, SH Kim, N Han, MA Iida, EM Gonzalez, M Otero-Garcia, ... Acta neuropathologica 143, 33-53, 2022 | 27 | 2022 |
| Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage K de Paiva Lopes, T Vinasco-Sandoval, RA Vialle, FM Paschoal, ... Scientific Reports 8 (1), 8786, 2018 | 26 | 2018 |
| Transcriptome deregulation of peripheral monocytes and whole blood in GBA-related Parkinson’s disease GM Riboldi, RA Vialle, E Navarro, E Udine, K de Paiva Lopes, ... Molecular Neurodegeneration 17 (1), 52, 2022 | 24 | 2022 |
| RAFTS3: Rapid alignment-free tool for sequence similarity search RA Vialle, F Oliveira Pedrosa, VA Weiss, D Guizelini, JH Tibaes, ... BioRxiv, 055269, 2016 | 13 | 2016 |
| Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water V de Souza, VC Piro, H Faoro, MZ Tadra-Sfeir, VK Chicora, D Guizelini, ... Genome announcements 1 (1), 10.1128/genomea. 00252-12, 2013 | 9 | 2013 |
| Comprehensive analysis of germline mutations in northern Brazil: a panel of 16 genes for hereditary cancer-predisposing syndrome investigation AF Vidal, RS Ferraz, A El-Husny, CS Silva, T Vinasco-Sandoval, ... BMC cancer 21, 1-8, 2021 | 7 | 2021 |
| RAFTS 3 G: an efficient and versatile clustering software to analyses in large protein datasets BT de Lima Nichio, AMR De Oliveira, CR De Pierri, LGC Santos, ... BMC Bioinformatics 20 (1), 392, 2019 | 7 | 2019 |
| Planktonic cyanobacteria from a tropical reservoir of southeastern Brazil: a picocyanobacteria rich community and new approaches for its characterization M Laux, VR Werner, RA Vialle, JM Ortega, A Giani Nova Hedwigia 107 (1-2), 229-256, 2018 | 7 | 2018 |
| Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes K de Paiva Lopes, FJ Campos-Laborie, RA Vialle, JM Ortega, ... BMC genomics 17 (8), 725, 2016 | 7 | 2016 |
| BOWS (bioinformatics open web services) to centralize bioinformatics tools in web services H Velloso, RA Vialle, JM Ortega BMC research notes 8 (1), 206, 2015 | 5 | 2015 |
| The human microglia responsome: a resource to better understand microglia states in health and disease G Snijders, K de Paiva Lopes, M Sneeboer, B Muller, F Gigase, R Vialle, ... bioRxiv, 2023.10. 12.562067, 2023 | 4 | 2023 |
| Role of miRNAs in Sigmoid Colon Cancer: A Search for Potential Biomarkers D Marques, LR Ferreira-Costa, LL Ferreira-Costa, AB Bezerra-Oliveira, ... Cancers 12 (11), 3311, 2020 | 4 | 2020 |
| MAPT haplotype-associated transcriptomic changes in progressive supranuclear palsy HW Ressler, J Humphrey, RA Vialle, B Babrowicz, S Kandoi, T Raj, ... Acta Neuropathologica Communications 12 (1), 135, 2024 | 3 | 2024 |
| Uncovering Plaque-Glia Niches in Human Alzheimer’s Disease Brains Using Spatial Transcriptomics DR Avey, B Ng, RA Vialle, NA Kearns, K de Paiva Lopes, A Iatrou, ... bioRxiv, 2024.09. 05.611566, 2024 | 2 | 2024 |
| Betacoronaviruses genome analysis reveals evolution toward specific codons usage: Implications for SARS‐CoV‐2 mitigation strategies EN Lopes, V Fonseca, D Frias, S Tosta, Á Salgado, R Assunção Vialle, ... Journal of medical virology 93 (9), 5630-5634, 2021 | 2 | 2021 |
Katia de Paiva LopesSystems Analyst and Computational Biologist, PhD.Bestätigte E-Mail-Adresse bei rush.edu