| Docking studies on DNA-ligand interactions: building and application of a protocol to identify the binding mode CG Ricci, PA Netz Journal of chemical information and modeling 49 (8), 1925-1935, 2009 | 230 | 2009 |
| Protospacer adjacent motif-induced allostery activates CRISPR-Cas9 G Palermo, CG Ricci, A Fernando, R Basak, M Jinek, I Rivalta, VS Batista, ... Journal of the American Chemical Society 139 (45), 16028-16031, 2017 | 126 | 2017 |
| Molecular mechanism of peroxisome proliferator-activated receptor α activation by WY14643: a new mode of ligand recognition and receptor stabilization A Bernardes, PCT Souza, JRC Muniz, CG Ricci, SD Ayers, NM Parekh, ... Journal of molecular biology 425 (16), 2878-2893, 2013 | 117 | 2013 |
| Key role of the REC lobe during CRISPR–Cas9 activation by ‘sensing’, ‘regulating’, and ‘locking’ the catalytic HNH domain G Palermo, JS Chen, CG Ricci, I Rivalta, M Jinek, VS Batista, JA Doudna, ... Quarterly Reviews of Biophysics 51, 1-11, 2018 | 111 | 2018 |
| Deciphering off-target effects in CRISPR-Cas9 through accelerated molecular dynamics CG Ricci, JS Chen, Y Miao, M Jinek, JA Doudna, JA McCammon, ... ACS central science 5 (4), 651-662, 2019 | 107 | 2019 |
| Molecular dynamics of DNA: comparison of force fields and terminal nucleotide definitions CG Ricci, ASC de Andrade, M Mottin, PA Netz The Journal of Physical Chemistry B 114 (30), 9882-9893, 2010 | 106 | 2010 |
| Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch JM Philpott, R Narasimamurthy, CG Ricci, AM Freeberg, SR Hunt, LE Yee, ... Elife 9, e52343, 2020 | 76 | 2020 |
| Allosteric Pathways in the PPARγ-RXRα nuclear receptor complex CG Ricci, RL Silveira, I Rivalta, VS Batista, MS Skaf Scientific reports 6 (1), 19940, 2016 | 58 | 2016 |
| A thrombin inhibitor from the gut of Boophilus microplus ticks CG Ricci, AFM Pinto, M Berger, C Termignoni Experimental and Applied Acarology 42, 291-300, 2007 | 42 | 2007 |
| DNA and IκBα both induce long-range conformational changes in NFκB KM Ramsey, HE Dembinski, W Chen, CG Ricci, EA Komives Journal of molecular biology 429 (7), 999-1008, 2017 | 39 | 2017 |
| PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period JM Philpott, AM Freeberg, J Park, K Lee, CG Ricci, SR Hunt, ... Molecular Cell 83 (10), 1677-1692. e8, 2023 | 28 | 2023 |
| RelA-Containing nfκb dimers have strikingly different DNA-Binding cavities in the absence of DNA D Narang, W Chen, CG Ricci, EA Komives Journal of molecular biology 430 (10), 1510-1520, 2018 | 18 | 2018 |
| The invisible dance of CRISPR-Cas9 G Palermo, CG Ricci, JA McCammon Physics today 72 (4), 30-36, 2019 | 17 | 2019 |
| Simulation of the Interactions between Tröger Bases and DNA CG Ricci, PA Netz Journal of the Brazilian Chemical Society 23, 1334-1346, 2012 | 12 | 2012 |
| Coupling Monte Carlo, variational implicit solvation, and binary level-set for simulations of biomolecular binding Z Zhang, CG Ricci, C Fan, LT Cheng, B Li, JA McCammon Journal of chemical theory and computation 17 (4), 2465-2478, 2021 | 11 | 2021 |
| “Martinizing” the variational implicit solvent method (VISM): solvation free energy for coarse-grained proteins CG Ricci, B Li, LT Cheng, J Dzubiella, JA McCammon The Journal of Physical Chemistry B 121 (27), 6538-6548, 2017 | 11 | 2017 |
| Dynamic Structure and Inhibition of a Malaria Drug Target: Geranylgeranyl Diphosphate Synthase CG Ricci, YL Liu, Y Zhang, Y Wang, W Zhu, E Oldfield, JA McCammon Biochemistry 55 (36), 5180–5190, 2016 | 11 | 2016 |
| Tailoring the variational implicit solvent method for new challenges: Biomolecular recognition and assembly CG Ricci, B Li, LT Cheng, J Dzubiella, JA McCammon Frontiers in Molecular Biosciences 5, 13, 2018 | 9 | 2018 |
| Heterogeneous Solvation in Distinctive Protein–Protein Interfaces Revealed by Molecular Dynamics Simulations CG Ricci, JA McCammon The Journal of Physical Chemistry B 122 (49), 11695-11701, 2018 | 8 | 2018 |
| Remarkable similarity in Plasmodium falciparum and Plasmodium vivax geranylgeranyl diphosphate synthase dynamics and its implication for antimalarial drug … A Venkatramani, C Gravina Ricci, E Oldfield, JA McCammon Chemical biology & drug design 91 (6), 1068-1077, 2018 | 6 | 2018 |
Giulia PalermoAssociate Professor, University of California RiversideBestätigte E-Mail-Adresse bei ucr.edu