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Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644, 2011 | 2308 | 2011 |
Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021 | 2107 | 2021 |
The genomic basis of adaptive evolution in threespine sticklebacks FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ... Nature 484 (7392), 55-61, 2012 | 1903 | 2012 |
A high-resolution map of human evolutionary constraint using 29 mammals K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ... Nature 478 (7370), 476-482, 2011 | 1290 | 2011 |
The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 1071 | 2014 |
The African coelacanth genome provides insights into tetrapod evolution CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ... Nature 496 (7445), 311-316, 2013 | 766 | 2013 |
The genome of the green anole lizard and a comparative analysis with birds and mammals J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ... Nature 477 (7366), 587-591, 2011 | 723 | 2011 |
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms DE Gordon, J Hiatt, M Bouhaddou, VV Rezelj, S Ulferts, H Braberg, ... Science 370 (6521), eabe9403, 2020 | 688 | 2020 |
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons I Braasch, AR Gehrke, JJ Smith, K Kawasaki, T Manousaki, J Pasquier, ... Nature genetics 48 (4), 427-437, 2016 | 601 | 2016 |
Mutations in Cdh23, encoding a new type of cadherin, cause stereocilia disorganization in waltzer, the mouse model for Usher syndrome type 1D FD Palma, RH Holme, EC Bryda, IA Belyantseva, R Pellegrino, B Kachar, ... Nature genetics 27 (1), 103-107, 2001 | 512 | 2001 |
Genomic architecture and introgression shape a butterfly radiation NB Edelman, PB Frandsen, M Miyagi, B Clavijo, J Davey, RB Dikow, ... Science 366 (6465), 594-599, 2019 | 471 | 2019 |
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ... Genome research 27 (5), 885-896, 2017 | 440 | 2017 |
Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication M Carneiro, CJ Rubin, F Di Palma, FW Albert, J Alföldi, AM Barrio, ... Science 345 (6200), 1074-1079, 2014 | 436 | 2014 |
Genome-wide synteny through highly sensitive sequence alignment: Satsuma MG Grabherr, P Russell, M Meyer, E Mauceli, J Alföldi, F Di Palma, ... Bioinformatics 26 (9), 1145-1151, 2010 | 316 | 2010 |
A comparative genomics multitool for scientific discovery and conservation Nature 587 (7833), 240-245, 2020 | 295 | 2020 |
Mutations in Mcoln3 associated with deafness and pigmentation defects in varitint-waddler (Va) mice F Di Palma, IA Belyantseva, HJ Kim, TF Vogt, B Kachar, K Noben-Trauth Proceedings of the National Academy of Sciences 99 (23), 14994-14999, 2002 | 263 | 2002 |
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ... PloS one 9 (3), e91172, 2014 | 258 | 2014 |
Adaptation and conservation insights from the koala genome RN Johnson, D O’Meally, Z Chen, GJ Etherington, SYW Ho, WJ Nash, ... Nature genetics 50 (8), 1102-1111, 2018 | 237 | 2018 |
3D genomics across the tree of life reveals condensin II as a determinant of architecture type C Hoencamp, O Dudchenko, AMO Elbatsh, S Brahmachari, ... Science 372 (6545), 984-989, 2021 | 220 | 2021 |