Expanding functional protein sequence spaces using generative adversarial networks D Repecka, V Jauniskis, L Karpus, E Rembeza, I Rokaitis, J Zrimec, ... Nature Machine Intelligence 3 (4), 324-333, 2021 | 335 | 2021 |
Computational scoring and experimental evaluation of enzymes generated by neural networks SR Johnson, X Fu, S Viknander, C Goldin, S Monaco, A Zelezniak, ... Nature biotechnology, 1-10, 2024 | 45 | 2024 |
Learning deep representations of enzyme thermal adaptation G Li, F Buric, J Zrimec, S Viknander, J Nielsen, A Zelezniak, ... Protein Science 31 (12), e4480, 2022 | 32 | 2022 |
The amino acid sequence determines protein abundance through its conformational stability and reduced synthesis cost F Buric, S Viknander, X Fu, O Lemke, J Zrimec, L Szyrwiel, M Mueleder, ... bioRxiv, 2023.10. 02.560091, 2023 | 3 | 2023 |
The Role of Metabolism in Shaping Enzyme Structures Over 400 Million Years of Evolution O Lemke, BM Heineike, S Viknander, N Cohen, JL Steenwyk, L Spranger, ... bioRxiv, 2024.05. 27.596037, 2024 | 1 | 2024 |
Amino acid sequence encodes protein abundance shaped by protein stability at reduced synthesis cost F Buric, S Viknander, X Fu, O Lemke, OG Carmona, J Zrimec, L Szyrwiel, ... Protein Science 34 (1), e5239, 2025 | | 2025 |
Structure‐based clustering and mutagenesis of bacterial tannases reveals the importance and diversity of active site‐capping domains T Coleman, S Viknander, AM Kirk, D Sandberg, E Caron, A Zelezniak, ... Protein Science 33 (12), e5202, 2024 | | 2024 |