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Thomas G Doak
Thomas G Doak
Indiana
Bestätigte E-Mail-Adresse bei indiana.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes
Y Ye, TG Doak
PLoS computational biology 5 (8), e1000465, 2009
6072009
Drift-barrier hypothesis and mutation-rate evolution
W Sung, MS Ackerman, SF Miller, TG Doak, M Lynch
Proceedings of the National Academy of Sciences 109 (45), 18488-18492, 2012
4212012
A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common" D35E" motif.
TG Doak, FP Doerder, CL Jahn, G Herrick
Proceedings of the National Academy of Sciences 91 (3), 942-946, 1994
4041994
RNA-mediated epigenetic programming of a genome-rearrangement pathway
M Nowacki, V Vijayan, Y Zhou, K Schotanus, TG Doak, LF Landweber
Nature 451 (7175), 153-158, 2008
3262008
Comparing bacterial communities inferred from 16S rRNA gene sequencing and shotgun metagenomics
N Shah, H Tang, TG Doak, Y Ye
Biocomputing 2011, 165-176, 2011
2572011
STAR-Fusion: fast and accurate fusion transcript detection from RNA-Seq
BJ Haas, A Dobin, N Stransky, B Li, X Yang, T Tickle, A Bankapur, ...
BioRxiv, 120295, 2017
2542017
The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome with 16,000 Tiny Chromosomes
EC Swart, JR Bracht, V Magrini, P Minx, X Chen, Y Zhou, JS Khurana, ...
PLoS biology 11 (1), e1001473, 2013
2462013
Diverse CRISPRs evolving in human microbiomes
M Rho, YW Wu, H Tang, TG Doak, Y Ye
PLoS genetics 8 (6), e1002441, 2012
2412012
The architecture of a scrambled genome reveals massive levels of genomic rearrangement during development
X Chen, JR Bracht, AD Goldman, E Dolzhenko, DM Clay, EC Swart, ...
Cell 158 (5), 1187-1198, 2014
2022014
Bats use magnetite to detect the earth's magnetic field
RA Holland, JL Kirschvink, TG Doak, M Wikelski
PLoS One 3 (2), e1676, 2008
1932008
A functional role for transposases in a large eukaryotic genome
M Nowacki, BP Higgins, GM Maquilan, EC Swart, TG Doak, ...
Science 324 (5929), 935-938, 2009
1592009
The Spontaneous Mutation Rate in the Fission Yeast Schizosaccharomyces pombe
A Farlow, H Long, S Arnoux, W Sung, TG Doak, M Nordborg, M Lynch
Genetics 201 (2), 737-744, 2015
1442015
Differential retention and divergent resolution of duplicate genes following whole-genome duplication
CL McGrath, JF Gout, P Johri, TG Doak, M Lynch
Genome research 24 (10), 1665-1675, 2014
1352014
Extraordinary genome stability in the ciliate Paramecium tetraurelia
W Sung, AE Tucker, TG Doak, E Choi, WK Thomas, M Lynch
Proceedings of the National Academy of Sciences 109 (47), 19339-19344, 2012
1262012
Stimulus-induced changes in methylesterase activity during chemotaxis in Escherichia coli.
MR Kehry, TG Doak, FW Dahlquist
Journal of Biological Chemistry 259 (19), 11828-11835, 1984
1201984
Insertion sequence-caused large-scale rearrangements in the genome of Escherichia coli
H Lee, TG Doak, E Popodi, PL Foster, H Tang
Nucleic acids research 44 (15), 7109-7119, 2016
1092016
Developmental precise excision of Oxytricha trifallax telomere-bearing elements and formation of circles closed by a copy of the flanking target duplication
K Williams, TG Doak, G Herrick
The EMBO journal 12 (12), 4593, 1993
971993
Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria
V Boscaro, M Felletti, C Vannini, MS Ackerman, PSG Chain, S Malfatti, ...
Proceedings of the National Academy of Sciences 110 (46), 18590-18595, 2013
932013
Disentangling the taxonomy of Rickettsiales and description of two novel symbionts (“Candidatus Bealeia paramacronuclearis” and “Candidatus Fokinia cryptica”) sharing the …
F Szokoli, M Castelli, E Sabaneyeva, M Schrallhammer, S Krenek, ...
Applied and Environmental Microbiology 82 (24), 7236-7247, 2016
912016
Insights into Three Whole-Genome Duplications Gleaned from the Paramecium caudatum Genome Sequence
CL McGrath, JF Gout, TG Doak, A Yanagi, M Lynch
Genetics 197 (4), 1417-1428, 2014
832014
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