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Francesco Paolo Casale
Francesco Paolo Casale
Helmholtz Pioneer Campus, Institute of AI for Health, Helmholtz Zentrum München
Bestätigte E-Mail-Adresse bei helmholtz-muenchen.de - Startseite
Titel
Zitiert von
Zitiert von
Jahr
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
25612015
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
13042015
Genetic drivers of epigenetic and transcriptional variation in human immune cells
L Chen, B Ge, FP Casale, L Vasquez, T Kwan, D Garrido-Martín, S Watt, ...
Cell 167 (5), 1398-1414. e24, 2016
7152016
Common genetic variation drives molecular heterogeneity in human iPSCs
H Kilpinen, A Goncalves, A Leha, V Afzal, K Alasoo, S Ashford, S Bala, ...
Nature 546 (7658), 370-375, 2017
6402017
DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation
MJ Dubin, P Zhang, D Meng, MS Remigereau, EJ Osborne, ...
elife 4, e05255, 2015
5242015
Gaussian process prior variational autoencoders
FP Casale, A Dalca, L Saglietti, J Listgarten, N Fusi
Advances in neural information processing systems 31, 2018
1562018
A linear mixed-model approach to study multivariate gene–environment interactions
R Moore, FP Casale, M Jan Bonder, D Horta, L Franke, I Barroso, ...
Nature genetics 51 (1), 180-186, 2019
1552019
Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types
S Ecker, L Chen, V Pancaldi, FO Bagger, JM Fernández, ...
Genome biology 18, 1-17, 2017
1232017
LIMIX: genetic analysis of multiple traits
C Lippert, FP Casale, B Rakitsch, O Stegle
BioRxiv, 003905, 2014
1232014
Efficient set tests for the genetic analysis of correlated traits
FP Casale, B Rakitsch, C Lippert, O Stegle
Nature methods 12 (8), 755-758, 2015
1212015
Genetic variation in the social environment contributes to health and disease
A Baud, MK Mulligan, FP Casale, JF Ingels, CJ Bohl, J Callebert, ...
PLoS genetics 13 (1), e1006498, 2017
932017
Probabilistic neural architecture search
FP Casale, J Gordon, N Fusi
arXiv preprint arXiv:1902.05116, 2019
892019
Promoter shape varies across populations and affects promoter evolution and expression noise
IE Schor, JF Degner, D Harnett, E Cannavò, FP Casale, H Shim, ...
Nature genetics 49 (4), 550-558, 2017
752017
Genetic variants regulating expression levels and isoform diversity during embryogenesis
E Cannavò, N Koelling, D Harnett, D Garfield, FP Casale, L Ciglar, ...
Nature 541 (7637), 402-406, 2017
652017
The germline genetic component of drug sensitivity in cancer cell lines
MP Menden, FP Casale, J Stephan, GR Bignell, F Iorio, U McDermott, ...
Nature communications 9 (1), 3385, 2018
472018
Joint genetic analysis using variant sets reveals polygenic gene-context interactions
FP Casale, D Horta, B Rakitsch, O Stegle
PLoS genetics 13 (4), e1006693, 2017
262017
Interactions between genetic variation and cellular environment in skeletal muscle gene expression
DL Taylor, DA Knowles, LJ Scott, AH Ramirez, FP Casale, BN Wolford, ...
PLoS One 13 (4), e0195788, 2018
212018
DNA methylation in
MJ Dubin, P Zhang, D Meng, MS Remigereau, EJ Osborne, ...
Arabidopsis, 2015
182015
Dissecting indirect genetic effects from peers in laboratory mice
A Baud, FP Casale, AM Barkley-Levenson, N Farhadi, C Montillot, ...
Genome biology 22, 1-21, 2021
102021
Predicting disease outcomes using machine learned models
D Koller, A Kaykas, E Sharon, CGS Cotta-Ramusino, PF Palmedo, ...
US Patent App. 17/350,761, 2021
92021
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