| Evidence for transmission of COVID-19 prior to symptom onset LC Tindale, JE Stockdale, M Coombe, ES Garlock, WYV Lau, M Saraswat, ... Elife 9, e57149, 2020 | 601* | 2020 |
| Quantifying the impact of COVID-19 control measures using a Bayesian model of physical distancing SC Anderson, AM Edwards, M Yerlanov, N Mulberry, JE Stockdale, ... PLoS computational biology 16 (12), e1008274, 2020 | 115 | 2020 |
| COVID-19 endgame: From pandemic to endemic? Vaccination, reopening and evolution in low-and high-vaccinated populations EB Are, Y Song, JE Stockdale, P Tupper, C Colijn Journal of Theoretical Biology 559, 111368, 2023 | 55 | 2023 |
| The potential of genomics for infectious disease forecasting JE Stockdale, P Liu, C Colijn Nature Microbiology 7 (11), 1736-1743, 2022 | 53 | 2022 |
| Modelling and Bayesian analysis of the Abakaliki smallpox data JE Stockdale, T Kypraios, PD O’Neill Epidemics 19, 13-23, 2017 | 28 | 2017 |
| How much leeway is there to relax COVID-19 control measures? SC Anderson, N Mulberry, AM Edwards, JE Stockdale, SA Iyaniwura, ... Epidemics 35, 100453, 2021 | 20 | 2021 |
| Quantifying the annual incidence and underestimation of seasonal influenza: A modelling approach Z McCarthy, S Athar, M Alavinejad, C Chow, I Moyles, K Nah, JD Kong, ... Theoretical Biology and Medical Modelling 17, 1-16, 2020 | 16 | 2020 |
| Transmission analysis of a large tuberculosis outbreak in London: A mathematical modelling study using genomic data Y Xu, JE Stockdale, V Naidu, H Hatherell, J Stimson, HR Stagg, ... Microbial genomics 6 (11), e000450, 2020 | 15 | 2020 |
| Phylogenetic identification of influenza virus candidates for seasonal vaccines M Hayati, B Sobkowiak, JE Stockdale, C Colijn Science Advances 9 (44), eabp9185, 2023 | 9 | 2023 |
| Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19 JE Stockdale, K Susvitasari, P Tupper, B Sobkowiak, N Mulberry, ... Nature Communications 14 (1), 4830, 2023 | 8 | 2023 |
| Pair-based likelihood approximations for stochastic epidemic models JE Stockdale, T Kypraios, PD O’Neill Biostatistics 22 (3), 575-597, 2021 | 7 | 2021 |
| Quantifying transmissibility of SARS-CoV-2 and impact of intervention within long-term healthcare facilities JE Stockdale, SC Anderson, AM Edwards, SA Iyaniwura, N Mulberry, ... Royal Society Open Science 9 (1), 211710, 2022 | 6 | 2022 |
| Long time frames to detect the impact of changing COVID-19 measures, Canada, March to July 2020 JE Stockdale, R Doig, J Min, N Mulberry, L Wang, LT Elliott, C Colijn Eurosurveillance 26 (40), 2001204, 2021 | 5* | 2021 |
| COVID-19 endgame: from pandemic to endemic? Vaccination, reopening and evolution in a well-vaccinated population EB Are, Y Song, JE Stockdale, P Tupper, C Colijn medRxiv, 2021.12. 18.21268002, 2021 | 4 | 2021 |
| Effective population size in simple infectious disease models M Yerlanov, P Agarwal, C Colijn, JE Stockdale Journal of Mathematical Biology 87 (6), 80, 2023 | 3 | 2023 |
| Evidence for Transmission of COVID-19 prior to Symptom Onset.” eLife 9 (June) LC Tindale, JE Stockdale, M Coombe, ES Garlock, WYV Lau, M Saraswat, ... | 2 | 2020 |
| Bayesian computational methods for stochastic epidemics JE Stockdale University of Nottingham, 2019 | 2 | 2019 |
| Including frameworks of public health ethics in computational modelling of infectious disease interventions AE Zarebski, N Tellioglu, JE Stockdale, JA Spencer, WR KhudaBukhsh, ... arXiv preprint arXiv:2502.00071, 2025 | | 2025 |
| A method to estimate the serial interval distribution under partially-sampled data K Susvitasari, P Tupper, JE Stockdale, C Colijn Epidemics 45, 100733, 2023 | | 2023 |
| Long-Term Dynamics of COVID-19 in a Multi-strain Model EB Are, J Stockdale, C Colijn Mathematics of Public Health: Mathematical Modelling from the Next …, 2023 | | 2023 |