| A mechanistic model and therapeutic interventions for COVID-19 involving a RAS-mediated bradykinin storm MR Garvin, C Alvarez, JI Miller, ET Prates, AM Walker, BK Amos, AE Mast, ... elife 9, e59177, 2020 | 457 | 2020 |
| Aspergillus niger β-glucosidase has a cellulase-like tadpole molecular shape: insights into glycoside hydrolase family 3 (GH3) β-glucosidase structure and function MA Lima, M Oliveira-Neto, MAS Kadowaki, FR Rosseto, ET Prates, ... Journal of Biological Chemistry 288 (46), 32991-33005, 2013 | 82 | 2013 |
| Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models MR Garvin, E T. Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ... Genome biology 21, 1-26, 2020 | 68 | 2020 |
| Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals? J Streich, J Romero, JGFM Gazolla, D Kainer, A Cliff, ET Prates, JB Brown, ... Current opinion in biotechnology 61, 217-225, 2020 | 60 | 2020 |
| Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism MV Liberato, RL Silveira, ÉT Prates, EA de Araujo, VOA Pellegrini, ... Scientific reports 6 (1), 23473, 2016 | 44* | 2016 |
| X-ray Structure and Molecular Dynamics Simulations of Endoglucanase 3 from Trichoderma harzianum: Structural Organization and Substrate Recognition by … ET Prates, I Stankovic, RL Silveira, MV Liberato, F Henrique-Silva, ... PLoS One 8 (3), e59069, 2013 | 43 | 2013 |
| Molecular basis of the thermostability and thermophilicity of laminarinases: X-ray structure of the hyperthermostable laminarinase from Rhodothermus marinus and molecular … L Bleicher, ET Prates, TCF Gomes, RL Silveira, AS Nascimento, AL Rojas, ... The Journal of Physical Chemistry B 115 (24), 7940-7949, 2011 | 41 | 2011 |
| Characterization of aromatic acid/proton symporters in Pseudomonas putida KT2440 toward efficient microbial conversion of lignin-related aromatics A Wada, ÉT Prates, R Hirano, AZ Werner, N Kamimura, DA Jacobson, ... Metabolic Engineering 64, 167-179, 2021 | 36 | 2021 |
| Structural insights into β-1, 3-glucan cleavage by a glycoside hydrolase family CR Santos, PACR Costa, PS Vieira, SET Gonzalez, TLR Correa, EA Lima, ... Nature chemical biology 16 (8), 920-929, 2020 | 36 | 2020 |
| Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro MA Hameedi, E T. Prates, MR Garvin, II Mathews, BK Amos, ... Nature Communications 13 (1), 5285, 2022 | 29 | 2022 |
| Potential pathogenicity determinants identified from structural proteomics of SARS-CoV and SARS-CoV-2 ET Prates, MR Garvin, M Pavicic, P Jones, M Shah, O Demerdash, ... Molecular biology and evolution 38 (2), 702-715, 2021 | 28 | 2021 |
| The impact of O-glycan chemistry on the stability of intrinsically disordered proteins ET Prates, X Guan, Y Li, X Wang, PK Chaffey, MS Skaf, MF Crowley, ... Chemical science 9 (15), 3710-3715, 2018 | 21 | 2018 |
| Structural variants identified using non-Mendelian inheritance patterns advance the mechanistic understanding of autism spectrum disorder D Kainer, AR Templeton, ET Prates, D Jacboson, ERO Allan, S Climer, ... Human Genetics and Genomics Advances 4 (1), 2023 | 15 | 2023 |
| Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on β-1, 3 and β-1, 4 glycosidic bonds MV Liberato, ET Prates, TA Gonçalves, A Bernardes, N Vilela, J Fattori, ... Journal of Biological Chemistry 296, 2021 | 15 | 2021 |
| Initiation of fatty acid biosynthesis in Pseudomonas putida KT2440 KJ McNaught, E Kuatsjah, M Zahn, ÉT Prates, H Shao, GJ Bentley, ... Metabolic Engineering 76, 193-203, 2023 | 13 | 2023 |
| Molecular basis of substrate recognition and specificity revealed in family 12 glycoside hydrolases F Calzado, ET Prates, TA Gonçalves, MV Rubio, MP Zubieta, FM Squina, ... Biotechnology and bioengineering 113 (12), 2577-2586, 2016 | 12 | 2016 |
| CHARMM‐based parameterization of neutral articaine—A widely used local anesthetic ÉT Prates, PCT Souza, M Pickholz, MS Skaf International Journal of Quantum Chemistry 111 (7‐8), 1339-1345, 2011 | 12 | 2011 |
| Spatial graph attention and curiosity-driven policy for antiviral drug discovery Y Wu, M Cashman, N Choma, ET Prates, VGM Vergara, M Shah, A Chen, ... arXiv preprint arXiv:2106.02190, 2021 | 11 | 2021 |
| Quantum biological insights into CRISPR-Cas9 sgRNA efficiency from explainable-AI driven feature engineering JM Noshay, T Walker, WG Alexander, DM Klingeman, J Romero, ... Nucleic Acids Research 51 (19), 10147-10161, 2023 | 10 | 2023 |
| Functional immune deficiency syndrome via intestinal infection in COVID-19 ET Prates, MR Garvin, M Pavicic, P Jones, M Shah, C Alvarez, D Kainer, ... BioRxiv, 2020 | 10 | 2020 |
