Artikel mit Open-Access-Mandaten - Daniel McDonaldWeitere Informationen
GesamtNIHNSFHHMIDoDDOEUSDAEuropean CommissionFWODFGNHMRCCASNSFCVANOAAGBMFAcademy of FinlandDFFWellcomeFAPESPCIHRNSERCBBSRCMRCNIHRRCNFordFWFSFINWOBHFGovernment of SpainSNFGatesNASAODNIARCGenome CanadaVillum FoundationDSTSwedish Research CouncilNERCZonMwState of CalifoniaPCORIDHFUK Research & Innovation
Nicht verfügbar: 3
Regional variation limits applications of healthy gut microbiome reference ranges and disease models
Y He, W Wu, HM Zheng, P Li, D McDonald, HF Sheng, MX Chen, ...
Nature medicine 24 (10), 1532-1535, 2018
Mandate: National Natural Science Foundation of China
The microbiome and human biology
R Knight, C Callewaert, C Marotz, ER Hyde, JW Debelius, D McDonald, ...
Annual review of genomics and human genetics 18 (1), 65-86, 2017
Mandate: US National Science Foundation, US National Institutes of Health, Howard …
Feasibility of home collection for urogenital microbiome samples
ES Lukacz, CS Fok, MK Bryant, DP Rodriguez-Ponciano, MR Meister, ...
Urogynecology, 10.1097, 2022
Mandate: US National Institutes of Health, Patient-Centered Outcomes Research Institute
Verfügbar: 122
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
Mandate: US National Institutes of Health, Howard Hughes Medical Institute
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
Mandate: US National Science Foundation, US National Institutes of Health, US …
Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
Mandate: US National Institutes of Health, Howard Hughes Medical Institute, Research …
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ...
Nature biotechnology 31 (9), 814-821, 2013
Mandate: US National Institutes of Health, Howard Hughes Medical Institute, Canadian …
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ...
The ISME journal 6 (3), 610-618, 2012
Mandate: US National Institutes of Health, Howard Hughes Medical Institute
The treatment-naive microbiome in new-onset Crohn’s disease
D Gevers, S Kugathasan, LA Denson, Y Vázquez-Baeza, W Van Treuren, ...
Cell host & microbe 15 (3), 382-392, 2014
Mandate: US National Institutes of Health
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
Mandate: US National Science Foundation, US Department of Energy, US National …
A framework for human microbiome research
nature 486 (7402), 215-221, 2012
Mandate: US National Institutes of Health, Howard Hughes Medical Institute, Research …
Best practices for analysing microbiomes
R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ...
Nature Reviews Microbiology 16 (7), 410-422, 2018
Mandate: US National Science Foundation, US National Institutes of Health, US …
Deblur rapidly resolves single-nucleotide community sequence patterns
A Amir, D McDonald, JA Navas-Molina, E Kopylova, JT Morton, Z Zech Xu, ...
MSystems 2 (2), 10.1128/msystems. 00191-16, 2017
Mandate: US National Science Foundation, US Department of Defense, US National …
Strains, functions and dynamics in the expanded Human Microbiome Project
J Lloyd-Price, A Mahurkar, G Rahnavard, J Crabtree, J Orvis, AB Hall, ...
Nature 550 (7674), 61-66, 2017
Mandate: US National Institutes of Health
Dynamics of the human gut microbiome in inflammatory bowel disease
J Halfvarson, CJ Brislawn, R Lamendella, Y Vázquez-Baeza, WA Walters, ...
Nature microbiology 2 (5), 1-7, 2017
Mandate: US National Science Foundation, US Department of Energy, US National …
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
Mandate: US National Science Foundation, US National Institutes of Health, National …
GABA-modulating bacteria of the human gut microbiota
P Strandwitz, KH Kim, D Terekhova, JK Liu, A Sharma, J Levering, ...
Nature microbiology 4 (3), 396-403, 2019
Mandate: US National Institutes of Health
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ...
Gigascience 1 (1), 2047-217X-1-7, 2012
Mandate: US National Institutes of Health, Howard Hughes Medical Institute
Forensic identification using skin bacterial communities
N Fierer, CL Lauber, N Zhou, D McDonald, EK Costello, R Knight
Proceedings of the National Academy of Sciences 107 (14), 6477-6481, 2010
Mandate: US National Institutes of Health, Howard Hughes Medical Institute
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
Mandate: US National Science Foundation, US Department of Energy, US National …
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