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Julius B. Lucks
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Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
JB Lucks, SA Mortimer, C Trapnell, S Luo, S Aviran, GP Schroth, ...
Proceedings of the National Academy of Sciences 108 (27), 11063-11068, 2011
4902011
Cell-free biosensors for rapid detection of water contaminants
JK Jung, KK Alam, MS Verosloff, DA Capdevila, M Desmau, PR Clauer, ...
Nature biotechnology 38 (12), 1451-1459, 2020
3612020
Versatile RNA-sensing transcriptional regulators for engineering genetic networks
JB Lucks, L Qi, VK Mutalik, D Wang, AP Arkin
Proceedings of the National Academy of Sciences 108 (21), 8617-8622, 2011
2912011
Creating small transcription activating RNAs
J Chappell, MK Takahashi, JB Lucks
Nature chemical biology 11 (3), 214-220, 2015
2802015
Rationally designed families of orthogonal RNA regulators of translation
VK Mutalik, L Qi, JC Guimaraes, JB Lucks, AP Arkin
Nature chemical biology 8 (5), 447-454, 2012
2112012
High-throughput determination of RNA structures
EJ Strobel, AM Yu, JB Lucks
Nature Reviews Genetics 19 (10), 615-634, 2018
1972018
Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, AM Yu, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124-1131, 2016
1942016
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription–translation (TX-TL) systems
MK Takahashi, J Chappell, CA Hayes, ZZ Sun, J Kim, V Singhal, ...
ACS synthetic biology 4 (5), 503-515, 2015
1842015
A renaissance in RNA synthetic biology: new mechanisms, applications and tools for the future
J Chappell, KE Watters, MK Takahashi, JB Lucks
Current opinion in chemical biology 28, 47-56, 2015
1822015
Computational design of small transcription activating RNAs for versatile and dynamic gene regulation
J Chappell, A Westbrook, M Verosloff, JB Lucks
Nature communications 8 (1), 1051, 2017
1742017
Point-of-Use Detection of Environmental Fluoride via a Cell-Free Riboswitch-Based Biosensor
W Thavarajah, AD Silverman, MS Verosloff, N Kelley-Loughnane, ...
ACS synthetic biology 9 (1), 10-18, 2019
1732019
Why on earth?: Evaluating hypotheses about the physiological functions of human geophagy
SL Young, PW Sherman, JB Lucks, GH Pelto
The Quarterly review of biology 86 (2), 97-120, 2011
1692011
SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing
D Loughrey, KE Watters, AH Settle, JB Lucks
Nucleic acids research 42 (21), e165-e165, 2014
1682014
Crystallography on curved surfaces
V Vitelli, JB Lucks, DR Nelson
Proceedings of the National Academy of Sciences 103 (33), 12323-12328, 2006
1672006
Toward scalable parts families for predictable design of biological circuits
JB Lucks, L Qi, WR Whitaker, AP Arkin
Current opinion in microbiology 11 (6), 567-573, 2008
1592008
Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry
AD Silverman, N Kelley-Loughnane, JB Lucks, MC Jewett
ACS synthetic biology 8 (2), 403-414, 2018
1552018
De novo-designed translation-repressing riboregulators for multi-input cellular logic
J Kim, Y Zhou, PD Carlson, M Teichmann, S Chaudhary, FC Simmel, ...
Nature chemical biology 15 (12), 1173-1182, 2019
1482019
Characterizing and prototyping genetic networks with cell-free transcription–translation reactions
MK Takahashi, CA Hayes, J Chappell, ZZ Sun, RM Murray, V Noireaux, ...
Methods 86, 60-72, 2015
1462015
Modeling and automation of sequencing-based characterization of RNA structure
S Aviran, C Trapnell, JB Lucks, SA Mortimer, S Luo, GP Schroth, ...
Proceedings of the National Academy of Sciences 108 (27), 11069-11074, 2011
1332011
An RNA Mapping DataBase for curating RNA structure mapping experiments
P Cordero, JB Lucks, R Das
Bioinformatics 28 (22), 3006-3008, 2012
1222012
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