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Avi Ma'ayan
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Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ...
Nucleic acids research 44 (W1), W90-W97, 2016
92182016
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
EY Chen, CM Tan, Y Kou, Q Duan, Z Wang, GV Meirelles, NR Clark, ...
BMC bioinformatics 14, 1-14, 2013
72992013
Mesenchymal and haematopoietic stem cells form a unique bone marrow niche
S Méndez-Ferrer, TV Michurina, F Ferraro, AR Mazloom, BD MacArthur, ...
nature 466 (7308), 829-834, 2010
39842010
Synaptic, transcriptional and chromatin genes disrupted in autism
S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, ...
Nature 515 (7526), 209-215, 2014
29552014
Gene set knowledge discovery with Enrichr
Z Xie, A Bailey, MV Kuleshov, DJB Clarke, JE Evangelista, SL Jenkins, ...
Current protocols 1 (3), e90, 2021
24372021
Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages
EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ...
Nature immunology 13 (11), 1118-1128, 2012
22432012
Patterns and rates of exonic de novo mutations in autism spectrum disorders
BM Neale, Y Kou, L Liu, A Ma’Ayan, KE Samocha, A Sabo, CF Lin, ...
Nature 485 (7397), 242-245, 2012
21002012
The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins
AD Rouillard, GW Gundersen, NF Fernandez, Z Wang, CD Monteiro, ...
Database 2016, baw100, 2016
15332016
Functional atlas of the integrin adhesome
R Zaidel-Bar, S Itzkovitz, A Ma'ayan, R Iyengar, B Geiger
Nature cell biology 9 (8), 858-867, 2007
14752007
ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
A Lachmann, H Xu, J Krishnan, SI Berger, AR Mazloom, A Ma'ayan
Bioinformatics 26 (19), 2438-2444, 2010
10432010
Minimal differentiation of classical monocytes as they survey steady-state tissues and transport antigen to lymph nodes
C Jakubzick, EL Gautier, SL Gibbings, DK Sojka, A Schlitzer, TE Johnson, ...
Immunity 39 (3), 599-610, 2013
9852013
Single-cell immune landscape of human atherosclerotic plaques
DM Fernandez, AH Rahman, NF Fernandez, A Chudnovskiy, ED Amir, ...
Nature medicine 25 (10), 1576-1588, 2019
7712019
ChEA3: transcription factor enrichment analysis by orthogonal omics integration
AB Keenan, D Torre, A Lachmann, AK Leong, ML Wojciechowicz, V Utti, ...
Nucleic acids research 47 (W1), W212-W224, 2019
7652019
Massive mining of publicly available RNA-seq data from human and mouse
A Lachmann, D Torre, AB Keenan, KM Jagodnik, HJ Lee, L Wang, ...
Nature communications 9 (1), 1366, 2018
7172018
Mutation of SHOC2 promotes aberrant protein N-myristoylation and causes Noonan-like syndrome with loose anagen hair
V Cordeddu, E Di Schiavi, LA Pennacchio, A Ma'ayan, A Sarkozy, ...
Nature genetics 41 (9), 1022-1026, 2009
4772009
Systems biology of stem cell fate and cellular reprogramming
BD MacArthur, A Ma'ayan, IR Lemischka
Nature reviews Molecular cell biology 10 (10), 672-681, 2009
4692009
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
4382018
Differential cytokine contributions of perivascular haematopoietic stem cell niches
N Asada, Y Kunisaki, H Pierce, Z Wang, NF Fernandez, A Birbrair, ...
Nature cell biology 19 (3), 214-223, 2017
4312017
Unexplored therapeutic opportunities in the human genome
TI Oprea, CG Bologa, S Brunak, A Campbell, GN Gan, A Gaulton, ...
Nature reviews Drug discovery 17 (5), 317-332, 2018
4182018
Formation of regulatory patterns during signal propagation in a mammalian cellular network
A Ma'ayan, SL Jenkins, S Neves, A Hasseldine, E Grace, B Dubin-Thaler, ...
Science 309 (5737), 1078-1083, 2005
4002005
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