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Dr. Holger Kruse
Dr. Holger Kruse
Senior Scientist, Pending AI
Bestätigte E-Mail-Adresse bei pending.ai
Titel
Zitiert von
Zitiert von
Jahr
Exploring nature and predicting strength of hydrogen bonds: a correlation analysis between atoms‐in‐molecules descriptors, binding energies, and energy components of symmetry …
S Emamian, T Lu, H Kruse, H Emamian
Journal of computational chemistry 40 (32), 2868-2881, 2019
10412019
PSI4 1.4: Open-source software for high-throughput quantum chemistry
DGA Smith, LA Burns, AC Simmonett, RM Parrish, MC Schieber, ...
The Journal of chemical physics 152 (18), 2020
8232020
A geometrical correction for the inter-and intra-molecular basis set superposition error in Hartree-Fock and density functional theory calculations for large systems
H Kruse, S Grimme
The Journal of chemical physics 136 (15), 2012
8042012
Why the standard B3LYP/6-31G* model chemistry should not be used in DFT calculations of molecular thermochemistry: understanding and correcting the problem
H Kruse, L Goerigk, S Grimme
The Journal of organic chemistry 77 (23), 10824-10834, 2012
5382012
The Mechanism of Dihydrogen Activation by Frustrated Lewis Pairs Revisited
S Grimme, H Kruse, L Goerigk, G Erker
Angewandte Chemie International Edition 49 (8), 1402-1405, 2010
521*2010
Benchmarking density functional methods against the S66 and S66x8 datasets for non‐covalent interactions
L Goerigk, H Kruse, S Grimme
ChemPhysChem 12 (17), 3421-3433, 2011
3442011
Identification of Thiazolidinones Spiro‐Fused to Indolin‐2‐ones as Potent and Selective Inhibitors of the Mycobacterium tuberculosis Protein Tyrosine Phosphatase …
VV Vintonyak, K Warburg, H Kruse, S Grimme, K Hübel, D Rauh, ...
Angewandte Chemie 34 (122), 6038-6041, 2010
3302010
Quantum chemical benchmark study on 46 RNA backbone families using a dinucleotide unit
H Kruse, A Mladek, K Gkionis, A Hansen, S Grimme, J Sponer
Journal of Chemical Theory and Computation 11 (10), 4972-4991, 2015
1102015
Ion binding to quadruplex DNA stems. Comparison of MM and QM descriptions reveals sizable polarization effects not included in contemporary simulations
K Gkionis, H Kruse, JA Platts, A Mladek, J Koca, J Sponer
Journal of chemical theory and computation 10 (3), 1326-1340, 2014
982014
Investigating inclusion complexes using quantum chemical methods
MP Waller, H Kruse, C Mueck-Lichtenfeld, S Grimme
Chemical Society Reviews 41 (8), 3119-3128, 2012
682012
Investigations of stacked DNA base-pair steps: highly accurate stacking interaction energies, energy decomposition, and many-body stacking effects
H Kruse, P Banas, J Šponer
Journal of chemical theory and computation 15 (1), 95-115, 2018
662018
Accurate quantum chemical description of non-covalent interactions in hydrogen filled endohedral fullerene complexes
H Kruse, S Grimme
The Journal of Physical Chemistry C 113 (39), 17006-17010, 2009
622009
QM computations on complete nucleic acids building blocks: analysis of the Sarcin–Ricin RNA motif using DFT-D3, HF-3c, PM6-D3H, and MM approaches
H Kruse, M Havrila, J Šponer
Journal of Chemical Theory and Computation 10 (6), 2615-2629, 2014
452014
Sequential electron transfer governs the UV-induced self-repair of DNA photolesions
R Szabla, H Kruse, P Stadlbauer, J Šponer, AL Sobolewski
Chemical Science 9 (12), 3131-3140, 2018
412018
Quantum chemistry common driver and databases (QCDB) and quantum chemistry engine (QCEngine): Automation and interoperability among computational chemistry programs
DGA Smith, AT Lolinco, ZL Glick, J Lee, A Alenaizan, TA Barnes, ...
The Journal of chemical physics 155 (20), 2021
402021
An intricate balance of hydrogen bonding, ion atmosphere and dynamics facilitates a seamless uracil to cytosine substitution in the U-turn of the neomycin-sensing riboswitch
M Krepl, J Vögele, H Kruse, E Duchardt-Ferner, J Wöhnert, J Sponer
Nucleic acids research 46 (13), 6528-6543, 2018
402018
UUCG RNA tetraloop as a formidable force-field challenge for MD simulations
K Mráziková, V Mlýnský, P Kührová, P Pokorná, H Kruse, M Krepl, ...
Journal of chemical theory and computation 16 (12), 7601-7617, 2020
392020
QM/MM calculations on protein–RNA complexes: Understanding limitations of classical MD simulations and search for reliable cost-effective QM methods
P Pokorna, H Kruse, M Krepl, J Sponer
Journal of chemical theory and computation 14 (10), 5419-5433, 2018
392018
Theoretical electronic circular dichroism spectroscopy of large organic and supramolecular systems
L Goerigk, H Kruse, S Grimme
Comprehensive chiroptical spectroscopy 1, 643-673, 2012
352012
2, 6-diaminopurine promotes repair of DNA lesions under prebiotic conditions
R Szabla, M Zdrowowicz, P Spisz, NJ Green, P Stadlbauer, H Kruse, ...
Nature Communications 12 (1), 3018, 2021
332021
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