| Defining genetic interaction R Mani, RP St. Onge, JL Hartman IV, G Giaever, FP Roth Proceedings of the National Academy of Sciences 105 (9), 3461-3466, 2008 | 586 | 2008 |
| Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions RPS Onge, R Mani, J Oh, M Proctor, E Fung, RW Davis, C Nislow, ... Nature genetics 39 (2), 199-206, 2007 | 373 | 2007 |
| Predictive models of molecular machines involved in Caenorhabditis elegans early embryogenesis KC Gunsalus, H Ge, AJ Schetter, DS Goldberg, JDJ Han, T Hao, GF Berriz, ... Nature 436 (7052), 861-865, 2005 | 337 | 2005 |
| System and method for using execution contexts in block diagram modeling JE Ciolfi, R Mani, DP Orofino, M Shakeri, M Ullman, M Yeddanapudi US Patent 7,809,545, 2010 | 132 | 2010 |
| Management of functions for block diagrams JE Ciolfi, MD Tocci, M Shakeri, M Yeddanapudi, K Tuschner, R Mani US Patent 7,178,112, 2007 | 103 | 2007 |
| Generation of code from a graphical model DA Linebarger, H Feng, R Mani, IIDP Orofino US Patent 7,974,825, 2011 | 101 | 2011 |
| Knocking out multigene redundancies via cycles of sexual assortment and fluorescence selection Y Suzuki, RPS Onge, R Mani, OD King, A Heilbut, VM Labunskyy, ... Nature methods 8 (2), 159-164, 2011 | 100 | 2011 |
| Graphical partitioning for parallel execution of executable block diagram models R Mani, KM Popovici, HT Simsek, BC Martin, JE Ciolfi US Patent 8,756,044, 2014 | 53 | 2014 |
| Signal navigation and label propagation in block diagrams H Feng, R Mani, JE Ciolfi, IIDP Orofino US Patent 7,665,025, 2010 | 46 | 2010 |
| Implicit frame-based processing for block-diagram simulation R Mani, D Orofino US Patent 7,275,026, 2007 | 45 | 2007 |
| Variants in graphical modeling environments J Ciolfi, Y Guo, R Mani US Patent 7,742,903, 2010 | 40 | 2010 |
| Applying constraints to block diagram models IIDP Orofino, MJ Longfritz, R Mani, DA Linebarger US Patent 7,424,410, 2008 | 37 | 2008 |
| Subgraph execution control in a graphical modeling environment JE Ciolfi, R Mani, Q Zhang US Patent 8,756,562, 2014 | 34 | 2014 |
| Extensible discrete-event simulation framework in SimEvents W Li, R Mani, PJ Mosterman 2016 Winter Simulation Conference (WSC), 943-954, 2016 | 31 | 2016 |
| Generation of code from a graphical model DA Linebarger, H Feng, R Mani, IIDP Orofino US Patent 8,135,570, 2012 | 29 | 2012 |
| Method and apparatus for integrated modeling, simulation and analysis of chemical and biochemical reactions RE Paxson, JF Hicklin, R Mani US Patent 7,844,431, 2010 | 25 | 2010 |
| Multi-threaded subgraph execution control in a graphical modeling environment JE Ciolfi, R Mani, Q Zhang US Patent 8,549,470, 2013 | 23 | 2013 |
| Mode-switched variable signal attributes in block diagrams R Mani, D Jia, H Feng, A Chutinan, Q Zhang, V Raghavan US Patent 8,286,129, 2012 | 20 | 2012 |
| Template composite signal for diagramming environment languages H Zarrinkoub, IIDP Orofino, R Mani US Patent 7,823,121, 2010 | 20 | 2010 |
| Method and apparatus for integrated modeling, simulation and analysis of chemical and biochemical reactions RE Paxson, JF Hicklin, R Mani US Patent 8,234,098, 2012 | 17 | 2012 |