| Arbovirus high fidelity variant loses fitness in mosquitoes and mice LL Coffey, Y Beeharry, AV Bordería, H Blanc, M Vignuzzi Proceedings of the National Academy of Sciences 108 (38), 16038-16043, 2011 | 290 | 2011 |
| Coxsackievirus B3 mutator strains are attenuated in vivo NF Gnädig, S Beaucourt, G Campagnola, AV Bordería, M Sanz-Ramos, ... Proceedings of the National Academy of Sciences 109 (34), E2294-E2303, 2012 | 162 | 2012 |
| Group selection and contribution of minority variants during virus adaptation determines virus fitness and phenotype AV Bordería, O Isakov, G Moratorio, R Henningsson, S Agüera-González, ... PLoS pathogens 11 (5), e1004838, 2015 | 129 | 2015 |
| Emergence and transmission of arbovirus evolutionary intermediates with epidemic potential KA Stapleford, LL Coffey, S Lay, AV Bordería, V Duong, O Isakov, ... Cell host & microbe 15 (6), 706-716, 2014 | 126 | 2014 |
| Optimization of human immunodeficiency virus gag expression by newcastle disease virus vectors for the induction of potent immune responses E Carnero, W Li, AV Borderia, B Moltedo, T Moran, A García-Sastre Journal of virology 83 (2), 584-597, 2009 | 93 | 2009 |
| Attenuation of RNA viruses by redirecting their evolution in sequence space G Moratorio, R Henningsson, C Barbezange, L Carrau, AV Bordería, ... Nature microbiology 2 (8), 1-12, 2017 | 81 | 2017 |
| Fidelity variants and RNA quasispecies AV Bordería, K Rozen-Gagnon, M Vignuzzi Quasispecies: From Theory to Experimental Systems, 303-322, 2016 | 69 | 2016 |
| Deep sequencing analysis of viral infection and evolution allows rapid and detailed characterization of viral mutant spectrum O Isakov, AV Bordería, D Golan, A Hamenahem, G Celniker, L Yoffe, ... Bioinformatics 31 (13), 2141-2150, 2015 | 68 | 2015 |
| RNA virus population diversity: implications for inter-species transmission AV Bordería, KA Stapleford, M Vignuzzi Current opinion in virology 1 (6), 643-648, 2011 | 65 | 2011 |
| Transmission bottlenecks and the evolution of fitness in rapidly evolving RNA viruses SF Elena, R Sanjuán, AV Borderı́a, PE Turner Infection, Genetics and Evolution 1 (1), 41-48, 2001 | 57 | 2001 |
| Increasing clinical severity during a dengue virus type 3 Cuban epidemic: deep sequencing of evolving viral populations R Rodriguez-Roche, H Blanc, AV Bordería, G Díaz, R Henningsson, ... Journal of virology 90 (9), 4320-4333, 2016 | 53 | 2016 |
| Isolation of fidelity variants of RNA viruses and characterization of virus mutation frequency S Beaucourt, AV Bordería, LL Coffey, NF Gnädig, M Sanz-Ramos, ... Journal of visualized experiments: JoVE, 2953, 2011 | 51 | 2011 |
| Interplay between RNA structure and protein evolution in HIV-1 R Sanjuán, AV Bordería Molecular Biology and Evolution 28 (4), 1333-1338, 2011 | 46 | 2011 |
| Initial fitness recovery of HIV-1 is associated with quasispecies heterogeneity and can occur without modifications in the consensus sequence AV Borderia, R Lorenzo-Redondo, M Pernas, C Casado, T Alvaro, ... PloS one 5 (4), e10319, 2010 | 40 | 2010 |
| Antiviral-activated dendritic cells: a paracrine-induced response state AV Bordería, BM Hartmann, A Fernandez-Sesma, TM Moran, SC Sealfon The Journal of Immunology 181 (10), 6872-6881, 2008 | 36 | 2008 |
| Dynamics of In Vitro Fitness Recovery of HIV-1 R Lorenzo-Redondo, AV Bordería, C Lopez-Galindez Journal of virology 85 (4), 1861-1870, 2011 | 32 | 2011 |
| Few mutations in the 5′ leader region mediate fitness recovery of debilitated human immunodeficiency type 1 viruses E Yuste, AV Bordería, E Domingo, C López-Galíndez Journal of virology 79 (9), 5421-5427, 2005 | 25 | 2005 |
| SELECTION PROMOTES ORGAN COMPARTMENTALIZATION IN HIV-1: EVIDENCE FROM GAG AND POL GENES AV Bordería, FM Codoñer, R Sanjuán Evolution 61 (2), 272-279, 2007 | 18 | 2007 |
| DISSEQT—DIStribution-based modeling of SEQuence space Time dynamics R Henningsson, G Moratorio, AV Borderia, M Vignuzzi, M Fontes Virus Evolution 5 (2), vez028, 2019 | 17 | 2019 |
| r-and K-selection in experimental populations of vesicular stomatitis virus AV Borderı́a, SF Elena Infection, Genetics and Evolution 2 (2), 137-143, 2002 | 15 | 2002 |