| STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2014 | 10861 | 2014 |
| The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ... Nucleic acids research, gkw937, 2016 | 7238 | 2016 |
| STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data D Szklarczyk, A Santos, C von Mering, LJ Jensen, P Bork, M Kuhn Nucleic acids research 44 (D1), D380-D384, 2015 | 1458 | 2015 |
| IntOGen-mutations identifies cancer drivers across tumor types A Gonzalez-Perez, C Perez-Llamas, J Deu-Pons, D Tamborero, ... Nature methods 10 (11), 1081, 2013 | 601 | 2013 |
| Deep Visual Proteomics defines single-cell identity and heterogeneity A Mund, F Coscia, A Kriston, R Hollandi, F Kovács, AD Brunner, E Migh, ... Nature Biotechnology, 1-10, 2022 | 296 | 2022 |
| Plasma proteome profiling discovers novel proteins associated with non‐alcoholic fatty liver disease L Niu, PE Geyer, NJW Albrechtsen, LL Gluud, A Santos, S Doll, PV Treit, ... Molecular Systems Biology 15 (3), e8793, 2019 | 242 | 2019 |
| Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes A Santos, R Wernersson, LJ Jensen Nucleic acids research 43 (D1), D1140-D1144, 2014 | 236 | 2014 |
| TISSUES 2.0: an integrative web resource on mammalian tissue expression O Palasca, A Santos, C Stolte, J Gorodkin, LJ Jensen Database 2018, 2018 | 222 | 2018 |
| A blood atlas of COVID-19 defines hallmarks of disease severity and specificity DJ Ahern, Z Ai, M Ainsworth, C Allan, A Allcock, A Ansari, ... medRxiv, 2021 | 212 | 2021 |
| A knowledge graph to interpret clinical proteomics data A Santos, AR Colaço, AB Nielsen, L Niu, M Strauss, PE Geyer, F Coscia, ... Nature Biotechnology, 1-11, 2022 | 210 | 2022 |
| Noninvasive proteomic biomarkers for alcohol-related liver disease L Niu, M Thiele, PE Geyer, DN Rasmussen, HE Webel, A Santos, R Gupta, ... Nature Medicine, 1-11, 2022 | 177 | 2022 |
| The proteome landscape of the kingdoms of life JB Müller, PE Geyer, AR Colaço, PV Treit, MT Strauss, M Oroshi, S Doll, ... Nature, 1-5, 2020 | 160 | 2020 |
| Deep muscle-proteomic analysis of freeze-dried human muscle biopsies reveals fiber type-specific adaptations to exercise training AS Deshmukh, DE Steenberg, M Hostrup, JB Birk, JK Larsen, A Santos, ... Nature communications 12 (1), 1-15, 2021 | 142 | 2021 |
| Spatially and cell-type resolved quantitative proteomic atlas of healthy human skin B Dyring-Andersen, MB Løvendorf, F Coscia, A Santos, LBP Møller, ... Nature communications 11 (1), 1-14, 2020 | 106 | 2020 |
| Glucagon acutely regulates hepatic amino acid catabolism and the effect may be disturbed by steatosis M Winther-Sørensen, KD Galsgaard, A Santos, SAJ Trammell, K Sulek, ... Molecular Metabolism, 101080, 2020 | 102 | 2020 |
| Plasma Proteome Profiling Reveals Dynamics of Inflammatory and Lipid Homeostasis Markers after Roux-En-Y Gastric Bypass Surgery NJW Albrechtsen, PE Geyer, S Doll, PV Treit, KN Bojsen-Møller, ... Cell Systems, 2018 | 100 | 2018 |
| Comprehensive comparison of large-scale tissue expression datasets A Santos, K Tsafou, C Stolte, S Pletscher-Frankild, SI O’Donoghue, ... PeerJ 3, e1054, 2015 | 98 | 2015 |
| The proteome of prostate cancer bone metastasis reveals heterogeneity with prognostic implications D Iglesias-Gato, E Thysell, S Tyanova, S Crnalic, A Santos, TS Lima, ... Clinical Cancer Research, 2018 | 87 | 2018 |
| Integrative Characterization of the R6/2 Mouse Model of Huntington’s Disease Reveals Dysfunctional Astrocyte Metabolism NH Skotte, JV Andersen, A Santos, BI Aldana, CW Willert, A Nørremølle, ... Cell reports 23 (7), 2211-2224, 2018 | 87 | 2018 |
| miRandola 2017: a curated knowledge base of non-invasive biomarkers F Russo, S Di Bella, F Vannini, G Berti, F Scoyni, HV Cook, A Santos, ... Nucleic acids research 46 (D1), D354-D359, 2017 | 81 | 2017 |
