Παρακολούθηση
Shoichi Ishida
Shoichi Ishida
Yokohama City University
Η διεύθυνση ηλεκτρονικού ταχυδρομείου έχει επαληθευτεί στον τομέα yokohama-cu.ac.jp - Αρχική σελίδα
Τίτλος
Παρατίθεται από
Παρατίθεται από
Έτος
kGCN: a graph-based deep learning framework for chemical structures
R Kojima, S Ishida, M Ohta, H Iwata, T Honma, Y Okuno
Journal of Cheminformatics 12, 1-10, 2020
852020
Extraction of protein dynamics information from cryo-EM maps using deep learning
S Matsumoto, S Ishida, M Araki, T Kato, K Terayama, Y Okuno
Nature Machine Intelligence 3 (2), 153-160, 2021
842021
Prediction and interpretable visualization of retrosynthetic reactions using graph convolutional networks
S Ishida, K Terayama, R Kojima, K Takasu, Y Okuno
Journal of chemical information and modeling 59 (12), 5026-5033, 2019
802019
CompRet: a comprehensive recommendation framework for chemical synthesis planning with algorithmic enumeration
R Shibukawa, S Ishida, K Yoshizoe, K Wasa, K Takasu, Y Okuno, K Terayama, K ...
Journal of Cheminformatics 12 (52), 2020
382020
AI-driven synthetic route design incorporated with retrosynthesis knowledge
S Ishida, K Terayama, R Kojima, K Takasu, Y Okuno
Journal of chemical information and modeling 62 (6), 1357-1367, 2022
362022
ChemTSv2: Functional molecular design using de novo molecule generator
S Ishida, T Aasawat, M Sumita, M Katouda, T Yoshizawa, K Yoshizoe, ...
Wiley Interdisciplinary Reviews: Computational Molecular Science 13 (6), e1680, 2023
112023
Design of antimicrobial peptides containing non-proteinogenic amino acids using multi-objective Bayesian optimisation
Y Murakami, S Ishida, Y Demizu, K Terayama
Digital Discovery 2 (5), 1347-1353, 2023
112023
Selective inhibitor design for kinase homologs using multiobjective Monte Carlo tree search
T Yoshizawa, S Ishida, T Sato, M Ohta, T Honma, K Terayama
Journal of Chemical Information and Modeling 62 (22), 5351-5360, 2022
112022
AI-driven molecular generation of not-patented pharmaceutical compounds using world open patent data
Y Shimizu, M Ohta, S Ishida, K Terayama, M Osawa, T Honma, K Ikeda
Journal of Cheminformatics 15 (1), 120, 2023
62023
Deep Learning-Based Differential Diagnosis of Follicular Thyroid Tumors Using Histopathological Images
S Nojima, T Kadoi, A Suzuki, C Kato, S Ishida, K Kido, K Fujita, Y Okuno, ...
Modern Pathology 36 (11), 100296, 2023
62023
Predicting condensate formation of protein and RNA under various environmental conditions
KY Chin, S Ishida, Y Sasaki, K Terayama
BMC bioinformatics 25 (1), 143, 2024
32024
A novel three-dimensional imaging system based on polysaccharide staining for accurate histopathological diagnosis of inflammatory bowel diseases
S Nojima, S Ishida, K Terayama, K Matsumoto, T Matsui, S Tahara, ...
Cellular and Molecular Gastroenterology and Hepatology 14 (4), 905-924, 2022
32022
GCN-Based Structure-Activity Relationship and DFT Studies of Staphylococcus aureus FabI Inhibitors
GC Veríssimo, VS dos Santos Junior, PO Fernandes, S Ishida, R Kojima, ...
International Journal of Quantitative Structure-Property Relationships …, 2022
22022
Combining three-dimensional acoustic coring and a convolutional neural network to quantify species contributions to benthic ecosystems
K Mizuno, K Terayama, S Ishida, JA Godbold, M Solan
Royal Society Open Science 11 (6), 240042, 2024
12024
Large Language Models Open New Way of AI-Assisted Molecule Design for Chemists
S Ishida, T Sato, T Honma, K Terayama
12024
Quantitative analysis of protein dynamics using a deep learning technique combined with experimental cryo-EM density data and MD simulations
S Matsumoto, S Ishida, K Terayama, Y Okuno
Biophysics and Physicobiology 20 (2), e200022, 2023
12023
Complex network prediction using deep learning
Y Tanaka, R Kojima, S Ishida, F Yamashita, Y Okuno
arXiv preprint arXiv:2104.03871, 2021
12021
Qcforever2: Advanced Automation of Quantum Chemistry Computations
M Sumita, K Terayama, S Ishida, K Suga, S Saito, K Tsuda
Journal of Computational Chemistry 46 (3), e70017, 2025
2025
GESim: Ultrafast Graph-Based Molecular Similarity Calculation via von Neumann Graph Entropy
H Shiokawa, S Ishida, K Terayama
2025
Extracting effective solutions hidden in large language models via generated comprehensive specialists: case studies in developing electronic devices
H Tomita, N Nakamura, S Ishida, T Kamiya, K Terayama
arXiv preprint arXiv:2501.00224, 2024
2024
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