Παρακολούθηση
Yixin Zhao
Yixin Zhao
Cold Spring Harbor Laboratory
Η διεύθυνση ηλεκτρονικού ταχυδρομείου έχει επαληθευτεί στον τομέα cshl.edu - Αρχική σελίδα
Τίτλος
Παρατίθεται από
Παρατίθεται από
Έτος
Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data
A Blumberg, Y Zhao, YF Huang, N Dukler, EJ Rice, AG Chivu, K Krumholz, ...
BMC biology 19, 1-17, 2021
602021
New microRNAs in Drosophila—birth, death and cycles of adaptive evolution
Y Lyu, Y Shen, H Li, Y Chen, L Guo, Y Zhao, E Hungate, S Shi, CI Wu, ...
PLoS genetics 10 (1), 2014
582014
Gene regulatory network stabilized by pervasive weak repressions-microRNA functions revealed by the May-Wigner theory
Y Chen, Y Shen, P Lin, D Tong, Y Zhao, S Allesina, X Shen, CI Wu
National Science Review, 2019
47*2019
Redundant and incoherent regulations of multiple phenotypes suggest microRNAs’ role in stability control
Z Liufu, Y Zhao, L Guo, G Miao, J Xiao, Y Lyu, Y Chen, S Shi, T Tang, ...
Genome research 27 (10), 1665-1673, 2017
452017
Weak Regulation of Many Targets Is Cumulatively Powerful—An Evolutionary Perspective on microRNA Functionality
Y Zhao, X Shen, T Tang, CI Wu
Molecular biology and evolution 34 (12), 3041-3046, 2017
362017
Characterization of gene expression signatures for the identification of cellular heterogeneity in the developing mammary gland
S Henry, MC Trousdell, SL Cyrill, Y Zhao, M Feigman, JM Bouhuis, ...
Journal of mammary gland biology and neoplasia 26 (1), 43-66, 2021
172021
Run or Die in the Evolution of New MicroRNAs — Testing the Red Queen Hypothesis on De Novo New Genes
Y Zhao, GA Lu, H Yang, P Lin, Z Liufu, T Tang, J Xu
Molecular Biology and Evolution, 2020
17*2020
RNA Pol II pausing facilitates phased pluripotency transitions by buffering transcription
A Abuhashem, AG Chivu, Y Zhao, EJ Rice, A Siepel, CG Danko, ...
Genes & Development 36 (13-14), 770-789, 2022
162022
Regulation of Large Number of Weak Targets—New Insights from Twin-microRNAs
Y Zhao, P Lin, Z Liufu, H Yang, Y Lyu, X Shen, CI Wu, T Tang
Genome biology and evolution 10 (5), 1255-1264, 2018
142018
Death of new microRNA genes in Drosophila via gradual loss of fitness advantages
GA Lu, Y Zhao, H Yang, A Lan, S Shi, Z Liufu, Y Huang, T Tang, J Xu, ...
Genome research 28 (9), 1309-1318, 2018
112018
Canalization of phenotypes–When the transcriptome is constantly but weakly perturbed
GA Lu, J Zhang, Y Zhao, Q Chen, P Lin, T Tang, Z Tang, H Wen, Z Liufu, ...
Molecular Biology and Evolution, 2023
9*2023
On the possibility of death of new genes–evidence from the deletion of de novo microRNAs
GA Lu, Y Zhao, Z Liufu, CI Wu
BMC Genomics 19 (1), 388, 2018
92018
Deconvolution of Expression for Nascent RNA Sequencing Data (DENR) Highlights Pre-RNA Isoform Diversity in Human Cells
Y Zhao, NE Dukler, G Barshad, S Toneyan, CG Danko, A Siepel
Bioinformatics 37 (24), 4727–4736, 2021
82021
Plasma cells in human pancreatic ductal adenocarcinoma secrete antibodies against self-antigens
M Yao, J Preall, JTH Yeh, D Pappin, P Cifani, Y Zhao, S Shen, P Moresco, ...
JCI insight 8 (21), e172449, 2023
72023
Model-based characterization of the equilibrium dynamics of transcription initiation and promoter-proximal pausing in human cells
Y Zhao, L Liu, R Hassett, A Siepel
Nucleic Acids Research, gkad843, 2023
62023
Weak Regulation of Many Targets Is Cumulatively Powerful—A Reply to Seitz on microRNA Functionality
Y Zhao, X Shen, T Tang, CI Wu
Molecular biology and evolution 36 (7), 1598-1599, 2019
32019
Gene expression as phenotype-Many small-step changes leading to little long-term phenotypic evolution
P Lin, GA Lu, Z Liufu, YX Zhao, Y Ruan, CI Wu, H Wen
bioRxiv, 2022.06. 24.497468, 2022
12022
Abstract A079: Loss of BPTF restores estrogen-regulated programs and suppress metastatic development of mammary tumors
C Chen, MF Ciccone, M Trousdell, D Chatterjee, Y Zhao, SM Lewis, ...
Cancer Research 84 (3_Supplement_1), A079-A079, 2024
2024
DNA-sequence and epigenomic determinants of local rates of transcription elongation
L Liu, Y Zhao, A Siepel
bioRxiv, https://doi.org/10.1101/2023.12.21.57293, 2023
2023
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