| Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 668 | 2019 |
| Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 582 | 2020 |
| Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 383 | 2020 |
| Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 378 | 2021 |
| Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 272 | 2021 |
| A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 264 | 2021 |
| Deep learning in proteomics B Wen, WF Zeng, Y Liao, Z Shi, SR Savage, W Jiang, B Zhang Proteomics 20 (21-22), 1900335, 2020 | 157 | 2020 |
| A highly annotated database of genes associated with platinum resistance in cancer D Huang, SR Savage, AP Calinawan, C Lin, B Zhang, P Wang, TK Starr, ... Oncogene 40 (46), 6395-6405, 2021 | 95 | 2021 |
| Proteogenomic data and resources for pan-cancer analysis Y Li, Y Dou, FDV Leprevost, Y Geffen, AP Calinawan, F Aguet, Y Akiyama, ... Cancer cell 41 (8), 1397-1406, 2023 | 78 | 2023 |
| Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources SR Savage, B Zhang Clinical Proteomics 17 (1), 27, 2020 | 56 | 2020 |
| Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer D Huang, S Chowdhury, H Wang, SR Savage, RG Ivey, JJ Kennedy, ... Cell Reports Medicine 2 (12), 2021 | 44 | 2021 |
| Modulation of the proteostasis network promotes tumor resistance to oncogenic KRAS inhibitors X Lv, X Lu, J Cao, Q Luo, Y Ding, F Peng, A Pataer, D Lu, D Han, ... Science 381 (6662), eabn4180, 2023 | 41 | 2023 |
| caAtlas: An immunopeptidome atlas of human cancer X Yi, Y Liao, B Wen, K Li, Y Dou, SR Savage, B Zhang Cancer Research 81 (13 Supplement), 1895-1895, 2021 | 35 | 2021 |
| Clinical Proteomic Tumor Analysis Consortium Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225, 2020 | 35 | 2020 |
| Hypoxia-induced expression of VEGF splice variants and protein in four retinal cell types WM Watkins, GW McCollum, SR Savage, ME Capozzi, JS Penn, ... Experimental eye research 116, 240-246, 2013 | 35 | 2013 |
| RNA-seq identifies a role for the PPARβ/δ inverse agonist GSK0660 in the regulation of TNFα-induced cytokine signaling in retinal endothelial cells SR Savage, GW McCollum, R Yang, JS Penn Molecular vision 21, 568, 2015 | 31 | 2015 |
| Peroxisome proliferator-activated receptor-β/δ regulates angiogenic cell behaviors and oxygen-induced retinopathy ME Capozzi, GW McCollum, SR Savage, JS Penn Investigative ophthalmology & visual science 54 (6), 4197-4207, 2013 | 30 | 2013 |
| Hemin-Induced Death Models Hemorrhagic Stroke and Is a Variant of Classical Neuronal Ferroptosis M Zille, JA Oses-Prieto, SR Savage, SS Karuppagounder, Y Chen, ... Journal of Neuroscience 42 (10), 2065-2079, 2022 | 29 | 2022 |
| Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer S Chowdhury, JJ Kennedy, RG Ivey, OD Murillo, N Hosseini, X Song, ... Cell 186 (16), 3476-3498. e35, 2023 | 28 | 2023 |
| Proteogenomic insights suggest druggable pathways in endometrial carcinoma Y Dou, L Katsnelson, MA Gritsenko, Y Hu, B Reva, R Hong, YT Wang, ... Cancer Cell 41 (9), 1586-1605. e15, 2023 | 27 | 2023 |
