| Integrated network analysis reveals new genes suggesting COVID-19 chronic effects and treatment A Pavel, G Del Giudice, A Federico, A Di Lieto, PAS Kinaret, A Serra, ... Briefings in bioinformatics 22 (2), 1430-1441, 2021 | 33 | 2021 |
| Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway‐Based Approach LA Saarimäki, J Morikka, A Pavel, S Korpilähde, G Del Giudice, ... Advanced Science 10 (2), 2203984, 2023 | 22 | 2023 |
| Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation A Serra, M Fratello, A Federico, R Ojha, R Provenzani, E Tasnadi, ... Briefings in bioinformatics 23 (1), bbab507, 2022 | 21 | 2022 |
| Integrated network pharmacology approach for drug combination discovery: a multi-cancer case study A Federico, M Fratello, G Scala, L Möbus, A Pavel, G Del Giudice, ... Cancers 14 (8), 2043, 2022 | 18 | 2022 |
| A curated gene and biological system annotation of adverse outcome pathways related to human health LA Saarimäki, M Fratello, A Pavel, S Korpilähde, J Leppänen, A Serra, ... Scientific Data 10 (1), 409, 2023 | 11 | 2023 |
| The potential of a data centred approach & knowledge graph data representation in chemical safety and drug design A Pavel, LA Saarimäki, L Möbus, A Federico, A Serra, D Greco Computational and structural biotechnology journal 20, 4837-4849, 2022 | 11 | 2022 |
| Nextcast: a software suite to analyse and model toxicogenomics data A Serra, LA Saarimäki, A Pavel, G Del Giudice, M Fratello, L Cattelani, ... Computational and structural biotechnology journal 20, 1413-1426, 2022 | 10 | 2022 |
| Network analysis of microarray data A Pavel, A Serra, L Cattelani, A Federico, D Greco Microarray Data Analysis, 161-186, 2022 | 10 | 2022 |
| A framework for the discovery of retinal biomarkers in optical coherence tomography angiography (OCTA) Y Giarratano, A Pavel, J Lian, R Andreeva, A Fontanella, R Sarkar, ... Ophthalmic Medical Image Analysis: 7th International Workshop, OMIA 2020 …, 2020 | 8 | 2020 |
| A network toxicology approach for mechanistic modelling of nanomaterial hazard and adverse outcomes G Del Giudice, A Serra, A Pavel, M Torres Maia, LA Saarimäki, M Fratello, ... Advanced Science 11 (32), 2400389, 2024 | 7 | 2024 |
| Volta: adVanced mOLecular neTwork analysis A Pavel, A Federico, G Del Giudice, A Serra, D Greco Bioinformatics 37 (23), 4587-4588, 2021 | 7 | 2021 |
| Advancing chemical safety assessment through an omics-based characterization of the test system-chemical interaction G Del Giudice, G Migliaccio, N D’Alessandro, LA Saarimäki, ... Frontiers in Toxicology 5, 1294780, 2023 | 5 | 2023 |
| The integration of large-scale public data and network analysis uncovers molecular characteristics of psoriasis A Federico, A Pavel, L Möbus, D McKean, G Del Giudice, V Fortino, ... Human Genomics 16 (1), 62, 2022 | 5 | 2022 |
| Unsupervised algorithms for microarray sample stratification M Fratello, L Cattelani, A Federico, A Pavel, G Scala, A Serra, D Greco Microarray Data Analysis, 121-146, 2022 | 5 | 2022 |
| Molecular annotation of AOPs guides the development of the next generation mechanistic chemical safety assessment and new approach methods LA Saarimäki, J Morikka, A Pavel, S Korpilähde, G del Giudice, ... bioRxiv, 2022.07. 08.499301, 2022 | 3 | 2022 |
| A Multi‐Dimensional Approach to Map Disease Relationships Challenges Classical Disease Views L Möbus, A Serra, M Fratello, A Pavel, A Federico, D Greco Advanced Science, 2401754, 2024 | 2 | 2024 |
| Integrated modeling for compound efficacy and safety assessment A Serra, M Fratello, G del Giudice, LA Saarimäki, A Pavel, A Federico, ... QSAR in Safety Evaluation and Risk Assessment, 49-64, 2023 | 2 | 2023 |
| Toxicogenomic assessment of in vitro macrophages exposed to profibrotic challenge reveals a sustained transcriptomic immune signature J Morikka, A Federico, L Möbus, S Inkala, A Pavel, S Sani, M Vaani, ... Computational and structural biotechnology journal 25, 194-204, 2024 | 1 | 2024 |
| Integrative network analysis suggests prioritised drugs for atopic dermatitis A Federico, L Möbus, Z Al-Abdulraheem, A Pavel, V Fortino, ... Journal of Translational Medicine 22 (1), 64, 2024 | 1 | 2024 |
| Knowledge Graphs, Network Models and Health Data Science Approaches for Toxicology and Pharmacology A Pavel Tampere University, 2024 | 1 | 2024 |
