| Enrichr-KG: bridging enrichment analysis across multiple libraries JE Evangelista, Z Xie, GB Marino, N Nguyen, DJB Clarke, A Ma’ayan Nucleic acids research 51 (W1), W168-W179, 2023 | 72 | 2023 |
| Pan-cancer proteogenomics characterization of tumor immunity F Petralia, W Ma, TM Yaron, FP Caruso, N Tignor, JM Wang, ... Cell 187 (5), 1255-1277. e27, 2024 | 32 | 2024 |
| Anatomy of the human osseous spiral lamina and cochlear partition bridge: relevance for cochlear partition motion S Raufer, C Idoff, A Zosuls, G Marino, N Blanke, IJ Bigio, JT O’Malley, ... Journal of the Association for Research in Otolaryngology 21, 171-182, 2020 | 12 | 2020 |
| Rummagene: massive mining of gene sets from supporting materials of biomedical research publications DJB Clarke, GB Marino, EZ Deng, Z Xie, JE Evangelista, A Ma’ayan Communications Biology 7 (1), 482, 2024 | 10* | 2024 |
| lncHUB2: aggregated and inferred knowledge about human and mouse lncRNAs GB Marino, ML Wojciechowicz, DJB Clarke, MV Kuleshov, Z Xie, M Jeon, ... Database 2023, baad009, 2023 | 9 | 2023 |
| Toxicology knowledge graph for structural birth defects JE Evangelista, DJB Clarke, Z Xie, GB Marino, V Utti, SL Jenkins, ... Communications Medicine 3 (1), 98, 2023 | 8* | 2023 |
| GeneRanger and TargetRanger: processed gene and protein expression levels across cells and tissues for target discovery GB Marino, M Ngai, DJB Clarke, RH Fleishman, EZ Deng, Z Xie, N Ahmed, ... Nucleic Acids Research 51 (W1), W213-W224, 2023 | 6 | 2023 |
| Computational screen to identify potential targets for immunotherapeutic identification and removal of senescence cells EZ Deng, RH Fleishman, Z Xie, GB Marino, DJB Clarke, A Ma'ayan Aging Cell 22 (6), e13809, 2023 | 3 | 2023 |
| D2H2: diabetes data and hypothesis hub GB Marino, N Ahmed, Z Xie, KM Jagodnik, J Han, DJB Clarke, ... Bioinformatics Advances 3 (1), vbad178, 2023 | 2 | 2023 |
| RummaGEO: automatic mining of human and mouse gene sets from GEO GB Marino, DJB Clarke, A Lachmann, EZ Deng, A Ma’ayan Patterns 5 (10), 2024 | 1 | 2024 |
| Multiomics2Targets identifies targets from cancer cohorts profiled with transcriptomics, proteomics, and phosphoproteomics EZ Deng, GB Marino, DJB Clarke, I Diamant, AC Resnick, W Ma, P Wang, ... Cell Reports Methods 4 (8), 2024 | 1 | 2024 |
| lncRNAlyzr: Enrichment Analysis for lncRNA Sets JE Evangelista, T Ali-Nasser, LE Malek, S Xie, GB Marino, AC Bester, ... Journal of Molecular Biology, 168938, 2025 | | 2025 |
| Protocol for using Multiomics2Targets to identify targets and driver kinases for cancer cohorts profiled with multi-omics assays GB Marino, EZ Deng, DJB Clarke, I Diamant, AC Resnick, W Ma, P Wang, ... STAR protocols 5 (4), 103457, 2024 | | 2024 |
| Personalized cell surface target identification from pan-cancer RNA-seq and proteomics profiling of tumors GB Marino, EZ Deng, DJB Clarke, W Ma, P Wang, AC Resnick, A Ma'ayan Cancer Research 84 (6_Supplement), 4897-4897, 2024 | | 2024 |
| Optimizing pan-cancer driver pathway analysis from patient transcriptomics and phosphoproteomics EZ Deng, GB Marino, DJ Clarke, W Ma, P Wang, A Ma'ayan Cancer Research 84 (6_Supplement), 7346-7346, 2024 | | 2024 |
| A proteogenomic study of high-grade glioma among adolescents and young adults N Tignor, MP Koptyra, S Chowdhury, W Ma, JL Rokita, M Gritsenko, ... Cancer Research 84 (6_Supplement), 3955-3955, 2024 | | 2024 |
| Playbook Workflow Builder: Interactive Construction of Bioinformatics Workflows from a Network of Microservices DJB Clarke, JE Evangelista, Z Xie, GB Marino, MR Maurya, S Srinivasan, ... bioRxiv, 2024.06. 08.598037, 2024 | | 2024 |
| Regulatory elements in SEM1-DLX5-DLX6 (7q21. 3) locus contribute to genetic control of coronal nonsyndromic craniosynostosis and bone density-related traits P Nicoletti, S Zafer, L Matok, I Irron, M Patrick, R Haklai, JE Evangelista, ... Genetics in medicine open 2, 101851, 2024 | | 2024 |
Avi Ma'ayanProfessor, Icahn School of Medicine at Mount Sinai, New York, NYΗ διεύθυνση ηλεκτρονικού ταχυδρομείου έχει επαληθευτεί στον τομέα mssm.edu
