Παρακολούθηση
Shun Liu
Shun Liu
Η διεύθυνση ηλεκτρονικού ταχυδρομείου έχει επαληθευτεί στον τομέα uchicago.edu
Τίτλος
Παρατίθεται από
Παρατίθεται από
Έτος
starBase v2. 0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
JH Li, S Liu, H Zhou, LH Qu, JH Yang
Nucleic acids research 42 (Database issue), D92-7, 2014
49092014
RMBase v2. 0: deciphering the map of RNA modifications from epitranscriptome sequencing data
JJ Xuan, WJ Sun, PH Lin, KR Zhou, S Liu, LL Zheng, LH Qu, JH Yang
Nucleic acids research 46 (D1), D327-D334, 2018
3762018
ChIPBase v2. 0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data
KR Zhou, S Liu, WJ Sun, LL Zheng, H Zhou, JH Yang, LH Qu
Nucleic Acids Research 45 (D1), D43-D50, 2017
3022017
deepBase v2. 0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data
LL Zheng, JH Li, J Wu, WJ Sun, S Liu, ZL Wang, H Zhou, JH Yang, LH Qu
Nucleic acids research, gkv1273, 2015
2172015
m6A RNA modifications are measured at single-base resolution across the mammalian transcriptome
L Hu, S Liu, Y Peng, R Ge, R Su, C Senevirathne, BT Harada, Q Dai, ...
Nature biotechnology 40 (8), 1210-1219, 2022
2052022
RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data
WJ Sun, JH Li, S Liu, J Wu, H Zhou, LH Qu, JH Yang
Nucleic acids research, gkv1036, 2015
2002015
RNA demethylation increases the yield and biomass of rice and potato plants in field trials
Q Yu, S Liu, L Yu, Y Xiao, S Zhang, X Wang, Y Xu, H Yu, Y Li, J Yang, ...
Nature Biotechnology 39 (12), 1581-1588, 2021
1732021
Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution
Q Dai, LS Zhang, HL Sun, K Pajdzik, L Yang, C Ye, CW Ju, S Liu, Y Wang, ...
Nature biotechnology 41 (3), 344-354, 2023
1432023
Stabilization of ERK-phosphorylated METTL3 by USP5 increases m6A methylation
HL Sun, AC Zhu, Y Gao, H Terajima, Q Fei, S Liu, L Zhang, Z Zhang, ...
Molecular cell 80 (4), 633-647. e7, 2020
1372020
tRF2Cancer: A web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers
LL Zheng, WL Xu, S Liu, WJ Sun, JH Li, J Wu, JH Yang, LH Qu
Nucleic acids research 44 (W1), W185-W193, 2016
1342016
Transcriptome-wide profiling and quantification of N6-methyladenosine by enzyme-assisted adenosine deamination
YL Xiao, S Liu, R Ge, Y Wu, C He, M Chen, W Tang
Nature biotechnology 41 (7), 993-1003, 2023
1212023
Inhibition of the JNK/MAPK signaling pathway by myogenesis-associated miRNAs is required for skeletal muscle development
SJ Xie, JH Li, HF Chen, YY Tan, SR Liu, Y Zhang, H Xu, JH Yang, S Liu, ...
Cell Death & Differentiation 25 (9), 1581-1597, 2018
1052018
Discovery of protein–lncRNA interactions by integrating large-scale CLIP-Seq and RNA-Seq datasets
JH Li, S Liu, LL Zheng, J Wu, WJ Sun, ZL Wang, H Zhou, LH Qu, JH Yang
Frontiers in bioengineering and biotechnology 2, 88, 2015
872015
REPIC: a database for exploring the N6-methyladenosine methylome
S Liu, A Zhu, C He, M Chen
Genome biology 21, 1-13, 2020
862020
miR‐372 and miR‐373 enhance the stemness of colorectal cancer cells by repressing differentiation signaling pathways
LQ Wang, P Yu, B Li, YH Guo, ZR Liang, LL Zheng, JH Yang, H Xu, S Liu, ...
Molecular oncology 12 (11), 1949-1964, 2018
702018
dreamBase: DNA modification, RNA regulation and protein binding of expressed pseudogenes in human health and disease
LL Zheng, KR Zhou, S Liu, DY Zhang, ZL Wang, ZR Chen, JH Yang, ...
Nucleic Acids Research 46 (D1), D85-D91, 2018
562018
m6A-SAC-seq for quantitative whole transcriptome m6A profiling
R Ge, C Ye, Y Peng, Q Dai, Y Zhao, S Liu, P Wang, L Hu, C He
Nature protocols 18 (2), 626-657, 2023
342023
StarScan: a web server for scanning small RNA targets from degradome sequencing data
S Liu, JH Li, J Wu, KR Zhou, H Zhou, JH Yang, LH Qu
Nucleic acids research, gkv524, 2015
302015
RBM33 is a unique m6A RNA-binding protein that regulates ALKBH5 demethylase activity and substrate selectivity
F Yu, AC Zhu, S Liu, B Gao, Y Wang, N Khudaverdyan, C Yu, Q Wu, ...
Molecular Cell 83 (12), 2003-2019. e6, 2023
292023
ColorCells: a database of expression, classification and functions of lncRNAs in single cells
LL Zheng, JH Xiong, WJ Zheng, JH Wang, ZL Huang, ZR Chen, XY Sun, ...
Briefings in Bioinformatics 22 (4), bbaa325, 2021
192021
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