| A subgraph isomorphism algorithm and its application to biochemical data V Bonnici, R Giugno, A Pulvirenti, D Shasha, A Ferro BMC bioinformatics 14, 1-13, 2013 | 289 | 2013 |
| Integrated microRNA and mRNA signatures associated with survival in triple negative breast cancer L Cascione, P Gasparini, F Lovat, S Carasi, A Pulvirenti, A Ferro, H Alder, ... PloS one 8 (2), e55910, 2013 | 204 | 2013 |
| Drug–target interaction prediction through domain-tuned network-based inference S Alaimo, A Pulvirenti, R Giugno, A Ferro Bioinformatics 29 (16), 2004-2008, 2013 | 197 | 2013 |
| miRandola: extracellular circulating microRNAs database F Russo, S Di Bella, G Nigita, V Macca, A Lagana, R Giugno, A Pulvirenti, ... Public Library of Science 7 (10), e47786, 2012 | 193 | 2012 |
| Enhancing density-based clustering: Parameter reduction and outlier detection C Cassisi, A Ferro, R Giugno, G Pigola, A Pulvirenti Information Systems 38 (3), 317-330, 2013 | 164 | 2013 |
| Computable set theory D Cantone, A Ferro, E Omodeo Clarendon Press, 1989 | 152 | 1989 |
| Decision procedures for elementary sublanguages of set theory. I. Multi‐level syllogistic and some extensions A Ferro, EG Omodeo, JT Schwartz Communications on pure and Applied Mathematics 33 (5), 599-608, 1980 | 132 | 1980 |
| Prediction of human population responses to toxic compounds by a collaborative competition F Eduati, LM Mangravite, T Wang, H Tang, JC Bare, R Huang, T Norman, ... Nature biotechnology 33 (9), 933-940, 2015 | 121 | 2015 |
| miRo: a miRNA knowledge base A Laganà, S Forte, A Giudice, MR Arena, PL Puglisi, R Giugno, ... Database 2009, bap008, 2009 | 118 | 2009 |
| Cellular and molecular effects of protons: apoptosis induction and potential implications for cancer therapy C Di Pietro, S Piro, G Tabbi, M Ragusa, V Di Pietro, V Zimmitti, F Cuda, ... Apoptosis 11, 57-66, 2006 | 117 | 2006 |
| Acute disseminated encephalomyelitis: a long-term prospective study and meta-analysis P Pavone, M Pettoello-Mantovano, A Le Pira, I Giardino, A Pulvirenti, ... Neuropediatrics 41 (06), 246-255, 2010 | 107 | 2010 |
| NetMatch: a Cytoscape plugin for searching biological networks A Ferro, R Giugno, G Pigola, A Pulvirenti, D Skripin, GD Bader, D Shasha Bioinformatics 23 (7), 910-912, 2007 | 105 | 2007 |
| Sigma: a set-cover-based inexact graph matching algorithm M Mongiovi, R Di Natale, R Giugno, A Pulvirenti, A Ferro, R Sharan Journal of bioinformatics and computational biology 8 (02), 199-218, 2010 | 102 | 2010 |
| Variability in the incidence of miRNAs and genes in fragile sites and the role of repeats and CpG islands in the distribution of genetic material A Lagana, F Russo, C Sismeiro, R Giugno, A Pulvirenti, A Ferro PloS one 5 (6), e11166, 2010 | 87 | 2010 |
| Antipole tree indexing to support range search and k-nearest neighbor search in metric spaces D Cantone, A Ferro, A Pulvirenti, DR Recupero, D Shasha IEEE transactions on knowledge and data engineering 17 (4), 535-550, 2005 | 86 | 2005 |
| Enhancing graph database indexing by suffix tree structure V Bonnici, A Ferro, R Giugno, A Pulvirenti, D Shasha Pattern Recognition in Bioinformatics: 5th IAPR International Conference …, 2010 | 84 | 2010 |
| miRandola 2017: a curated knowledge base of non-invasive biomarkers F Russo, S Di Bella, F Vannini, G Berti, F Scoyni, HV Cook, A Santos, ... Nucleic acids research 46 (D1), D354-D359, 2018 | 81 | 2018 |
| Computational approaches for the analysis of ncRNA through deep sequencing techniques D Veneziano, G Nigita, A Ferro Frontiers in bioengineering and biotechnology 3, 77, 2015 | 81 | 2015 |
| Computational design of artificial RNA molecules for gene regulation A Laganà, D Veneziano, F Russo, A Pulvirenti, R Giugno, CM Croce, ... RNA Bioinformatics, 393-412, 2015 | 75 | 2015 |
| Grapes: A software for parallel searching on biological graphs targeting multi-core architectures R Giugno, V Bonnici, N Bombieri, A Pulvirenti, A Ferro, D Shasha PloS one 8 (10), e76911, 2013 | 72 | 2013 |
