| A deep proteome and transcriptome abundance atlas of 29 healthy human tissues D Wang, B Eraslan, T Wieland, B Hallström, T Hopf, DP Zolg, J Zecha, ... Molecular systems biology 15 (2), e8503, 2019 | 699 | 2019 |
| Mass-spectrometry-based draft of the Arabidopsis proteome J Mergner, M Frejno, M List, M Papacek, X Chen, A Chaudhary, ... Nature 579 (7799), 409-414, 2020 | 442 | 2020 |
| ProteomicsDB T Schmidt, P Samaras, M Frejno, S Gessulat, M Barnert, H Kienegger, ... Nucleic acids research 46 (D1), D1271-D1281, 2018 | 240 | 2018 |
| ProteomicsDB: a multi-omics and multi-organism resource for life science research P Samaras, T Schmidt, M Frejno, S Gessulat, M Reinecke, A Jarzab, ... Nucleic acids research 48 (D1), D1153-D1163, 2020 | 209 | 2020 |
| Ceramide synthase 5 is essential to maintain C16: 0-ceramide pools and contributes to the development of diet-induced obesity D Gosejacob, PS Jäger, K Vom Dorp, M Frejno, AC Carstensen, ... Journal of Biological Chemistry 291 (13), 6989-7003, 2016 | 133 | 2016 |
| moCluster: identifying joint patterns across multiple omics data sets C Meng, D Helm, M Frejno, B Kuster Journal of proteome research 15 (3), 755-765, 2016 | 131 | 2016 |
| THADA regulates the organismal balance between energy storage and heat production A Moraru, G Cakan-Akdogan, K Strassburger, M Males, S Mueller, M Jabs, ... Developmental Cell 41 (1), 72-81. e6, 2017 | 82 | 2017 |
| Proteome activity landscapes of tumor cell lines determine drug responses M Frejno, C Meng, B Ruprecht, T Oellerich, S Scheich, K Kleigrewe, ... Nature communications 11 (1), 3639, 2020 | 72 | 2020 |
| Challenges in clinical metaproteomics highlighted by the analysis of acute leukemia patients with gut colonization by multidrug-resistant enterobacteriaceae J Rechenberger, P Samaras, A Jarzab, J Behr, M Frejno, A Djukovic, ... Proteomes 7 (1), 2, 2019 | 65 | 2019 |
| INFERYS rescoring: Boosting peptide identifications and scoring confidence of database search results DP Zolg, S Gessulat, C Paschke, M Graber, M Rathke‐Kuhnert, F Seefried, ... Rapid Communications in Mass Spectrometry, e9128, 2021 | 64 | 2021 |
| Pharmacoproteomic characterisation of human colon and rectal cancer M Frejno, R Zenezini Chiozzi, M Wilhelm, H Koch, R Zheng, S Klaeger, ... Molecular systems biology 13 (11), 951, 2017 | 59 | 2017 |
| A fitness assay for comparing RNAi effects across multiple C. elegans genotypes M Elvin, LB Snoek, M Frejno, U Klemstein, JE Kammenga, GB Poulin BMC genomics 12, 1-14, 2011 | 58 | 2011 |
| Mass spectrometry-based draft of the mouse proteome P Giansanti, P Samaras, Y Bian, C Meng, A Coluccio, M Frejno, ... Nature methods 19 (7), 803-811, 2022 | 46 | 2022 |
| Identification of molecular targets for the targeted treatment of gastric cancer using dasatinib RC Montenegro, A Howarth, A Ceroni, V Fedele, B Farran, FP Mesquita, ... Oncotarget 11 (5), 535, 2020 | 37 | 2020 |
| Proteomic and transcriptomic profiling of aerial organ development in Arabidopsis J Mergner, M Frejno, M Messerer, D Lang, P Samaras, M Wilhelm, ... Scientific Data 7 (1), 334, 2020 | 34 | 2020 |
| Optimized enrichment of phosphoproteomes by Fe-IMAC column chromatography B Ruprecht, H Koch, P Domasinska, M Frejno, B Kuster, S Lemeer Proteomics: Methods and Protocols, 47-60, 2017 | 32 | 2017 |
| Chemical phosphoproteomics sheds new light on the targets and modes of action of AKT inhibitors S Wiechmann, B Ruprecht, T Siekmann, R Zheng, M Frejno, E Kunold, ... ACS Chemical Biology 16 (4), 631-641, 2021 | 27 | 2021 |
| Phosphoproteome profiling reveals molecular mechanisms of growth-factor-mediated kinase inhibitor resistance in EGFR-overexpressing cancer cells H Koch, M Wilhelm, B Ruprecht, S Beck, M Frejno, S Klaeger, B Kuster Journal of proteome research 15 (12), 4490-4504, 2016 | 27 | 2016 |
| Adaptation to HIF1α deletion in hypoxic cancer cells by upregulation of GLUT14 and creatine metabolism A Valli, M Morotti, CE Zois, PK Albers, T Soga, K Feldinger, R Fischer, ... Molecular Cancer Research 17 (7), 1531-1544, 2019 | 22 | 2019 |
| CHIMERYS: an AI-driven leap forward in peptide identification M Frejno, DP Zolg, T Schmidt, S Gessulat, M Graber, F Seefried, ... the 69th ASMS Conference on Mass Spectrometry and Allied Topics, 2021 | 9 | 2021 |
