| Systems Biology and Machine Learning in Plant–Pathogen Interactions B Mishra, N Kumar, MS Mukhtar Molecular Plant-Microbe Interactions 32 (1), 45-55, 2019 | 83 | 2019 |
| Integrative network biology framework elucidates molecular mechanisms of SARS-CoV-2 pathogenesis N Kumar, B Mishra, A Mehmood, M Athar, MS Mukhtar Iscience 23 (9), 2020 | 54 | 2020 |
| Inference of gene regulatory network from single-cell transcriptomic data using pySCENIC N Kumar, B Mishra, M Athar, S Mukhtar Modeling Transcriptional Regulation: Methods and Protocols, 171-182, 2021 | 52 | 2021 |
| Network biology to uncover functional and structural properties of the plant immune system B Mishra, N Kumar, MS Mukhtar Current Opinion in Plant Biology 62, 102057, 2021 | 36 | 2021 |
| Phosphoprotein-based biomarkers as predictors for cancer therapy AM Carter, C Tan, K Pozo, R Telange, R Molinaro, A Guo, E De Rosa, ... Proceedings of the National Academy of Sciences 117 (31), 18401-18411, 2020 | 30 | 2020 |
| Dynamic modeling of transcriptional gene regulatory network uncovers distinct pathways during the onset of Arabidopsis leaf senescence B Mishra, Y Sun, TC Howton, N Kumar, MS Mukhtar npj Systems Biology and Applications 4 (1), 2018 | 29 | 2018 |
| Molecular pathology associated with altered synaptic transcriptome in the dorsolateral prefrontal cortex of depressed subjects Y Yoshino, B Roy, N Kumar, M Shahid Mukhtar, Y Dwivedi Translational psychiatry 11 (1), 73, 2021 | 27 | 2021 |
| Ranking plant network nodes based on their centrality measures N Kumar, MS Mukhtar Entropy 25 (4), 676, 2023 | 19 | 2023 |
| A rice protein interaction network reveals high centrality nodes and candidate pathogen effector targets B Mishra, N Kumar, MS Mukhtar Computational and Structural Biotechnology Journal 20, 2001-2012, 2022 | 17 | 2022 |
| Riboswitch regulation in cyanobacteria is independent of their habitat adaptations P Singh, N Kumar, M Jethva, S Yadav, P Kumari, A Thakur, HR Kushwaha Physiology and Molecular Biology of Plants 24, 315-324, 2018 | 15 | 2018 |
| In Silico Elucidation and Inhibition Studies of Selected Phytoligands Against Mitogen-Activated Protein Kinases of Protozoan Parasites CL Gupta, S Akhtar, N Kumar, J Ali, N Pathak, P Bajpai Interdisciplinary Sciences: Computational Life Sciences 8, 41-52, 2016 | 15 | 2016 |
| Cdk5 drives formation of heterogeneous pancreatic neuroendocrine tumors AM Carter, N Kumar, B Herring, C Tan, R Guenter, R Telange, W Howse, ... Oncogenesis, 2021 | 14 | 2021 |
| Integrative network biology framework elucidates molecular mechanisms of SARS-CoV-2 pathogenesis. iScience 23 (9): 101526 N Kumar, B Mishra, A Mehmood, M Athar, MS Mukhtar | 11 | 2020 |
| A pipeline of integrating transcriptome and interactome to elucidate central nodes in host-pathogens interactions N Kumar, B Mishra, MS Mukhtar STAR protocols 3 (3), 101608, 2022 | 10 | 2022 |
| Network Biology Analyses and Dynamic Modeling of Gene Regulatory Networks under Drought Stress Reveal Major Transcriptional Regulators in Arabidopsis N Kumar, BK Mishra, J Liu, B Mohan, D Thingujam, ... International journal of molecular sciences 24 (8), 7349, 2023 | 8 | 2023 |
| PCV: an alignment free method for finding homologous nucleotide sequences and its application in phylogenetic study R Kumar, BK Mishra, T Lahiri, G Kumar, N Kumar, R Gupta, MK Pal Interdisciplinary Sciences: Computational Life Sciences 9, 173-183, 2017 | 8 | 2017 |
| A pipeline of integrating transcriptome and interactome to elucidate central nodes in host-pathogens interactions. STAR Protoc 3 (3): 101608 N Kumar, B Mishra, MS Mukhtar | 5 | 2022 |
| A pipeline of integrating transcriptome and interactome to elucidate central nodes in host-pathogens interactions. STAR Protoc 3 (3): 101608 N Kumar, B Mishra, MS Mukhtar | 5 | 2022 |
| Dynamic regulatory event mining by iDREM in large-scale multi-omics datasets during biotic and abiotic stress in plants B Mishra, N Kumar, J Liu, KM Pajerowska-Mukhtar Modeling Transcriptional Regulation: Methods and Protocols, 191-202, 2021 | 5 | 2021 |
| Mohammad Athar & M Shahid Mukhtar N Kumar, B Mishra, A Mehmood Integrative Network Biology Framework Elucidates Molecular Mechanisms of …, 2020 | 4 | 2020 |
Professor Shahid MukhtarClemson UniversityVerified email at clemson.edu
