| The repertoire of mutational signatures in human cancer LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AW Tian Ng, Y Wu, ... Nature 578 (7793), 94-101, 2020 | 2907 | 2020 |
| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 2032* | 2020 |
| Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 585 | 2020 |
| A mutational signature reveals alterations underlying deficient homologous recombination repair in breast cancer P Polak, J Kim, LZ Braunstein, R Karlic, NJ Haradhavala, G Tiao, ... Nature genetics 49 (10), 1476-1486, 2017 | 538 | 2017 |
| RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues K Yizhak, F Aguet, J Kim, JM Hess, K Kübler, J Grimsby, R Frazer, ... Science 364 (6444), eaaw0726, 2019 | 487 | 2019 |
| Mutational strand asymmetries in cancer genomes reveal mechanisms of DNA damage and repair NJ Haradhvala, P Polak, P Stojanov, KR Covington, E Shinbrot, JM Hess, ... Cell 164 (3), 538-549, 2016 | 453 | 2016 |
| Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing SR Viswanathan, G Ha, AM Hoff, JA Wala, J Carrot-Zhang, CW Whelan, ... Cell 174 (2), 433-447. e19, 2018 | 358 | 2018 |
| Single-cell RNA sequencing reveals compromised immune microenvironment in precursor stages of multiple myeloma O Zavidij, NJ Haradhvala, TH Mouhieddine, R Sklavenitis-Pistofidis, S Cai, ... Nature cancer 1 (5), 493-506, 2020 | 301 | 2020 |
| Whole-genome sequencing reveals activation-induced cytidine deaminase signatures during indolent chronic lymphocytic leukaemia evolution S Kasar, J Kim, R Improgo, G Tiao, P Polak, N Haradhvala, MS Lawrence, ... Nature communications 6 (1), 8866, 2015 | 299 | 2015 |
| CAR T cell killing requires the IFNγR pathway in solid but not liquid tumours RC Larson, MC Kann, SR Bailey, NJ Haradhvala, PM Llopis, AA Bouffard, ... Nature 604 (7906), 563-570, 2022 | 269 | 2022 |
| Distinct mutational signatures characterize concurrent loss of polymerase proofreading and mismatch repair NJ Haradhvala, J Kim, YE Maruvka, P Polak, D Rosebrock, D Livitz, ... Nature communications 9 (1), 1746, 2018 | 188 | 2018 |
| Scaling computational genomics to millions of individuals with GPUs A Taylor-Weiner, F Aguet, NJ Haradhvala, S Gosai, S Anand, J Kim, ... Genome biology 20, 1-5, 2019 | 181 | 2019 |
| The repertoire of mutational signatures in human cancer LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AWT Ng, Y Wu, A Boot, ... BioRxiv, 322859, 2018 | 181 | 2018 |
| Distinct cellular dynamics associated with response to CAR-T therapy for refractory B cell lymphoma Nature Medicine, 1848–1859, 2022 | 152 | 2022 |
| Analysis of somatic microsatellite indels identifies driver events in human tumors YE Maruvka, KW Mouw, R Karlic, P Parasuraman, A Kamburov, P Polak, ... Nature biotechnology 35 (10), 951-959, 2017 | 140 | 2017 |
| Passenger hotspot mutations in cancer JM Hess, A Bernards, J Kim, M Miller, A Taylor-Weiner, NJ Haradhvala, ... Cancer Cell 36 (3), 288-301. e14, 2019 | 87 | 2019 |
| DNA polymerase and mismatch repair exert distinct microsatellite instability signatures in normal and malignant human cells J Chung, YE Maruvka, S Sudhaman, J Kelly, NJ Haradhvala, V Bianchi, ... Cancer discovery 11 (5), 1176-1191, 2021 | 73 | 2021 |
| Designing sensitive viral diagnostics with machine learning HC Metsky, NL Welch, PP Pillai, NJ Haradhvala, L Rumker, S Mantena, ... Nature biotechnology 40 (7), 1123-1131, 2022 | 70 | 2022 |
| Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation Y Geffen, S Anand, Y Akiyama, TM Yaron, Y Song, JL Johnson, ... Cell 186 (18), 3945-3967. e26, 2023 | 63 | 2023 |
| Single cell characterization of myeloma and its precursor conditions reveals transcriptional signatures of early tumorigenesis R Boiarsky, NJ Haradhvala, JB Alberge, R Sklavenitis-Pistofidis, ... Nature Communications 13 (1), 7040, 2022 | 50 | 2022 |
