Jens Nielsen

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Intawat NookaewUniversity of Arkansas for Medical SciencesVerified email at uams.edu
Adil MardinogluScience for Life Laboratory, KTH-Royal Institute of Technology / King's College LondonVerified email at scilifelab.se
Lisbeth Olssonprofessor, Chalmers University of TechnologyVerified email at chalmers.se
Mathias UhlénScience for Life Laboratory, KTH, StockholmVerified email at scilifelab.se
Yun ChenDepartment of Biology and Biological Engineering, Chalmers University of TechnologyVerified email at chalmers.se
Eduard J KerkhovenDocent, Chalmers University of TechnologyVerified email at chalmers.se
Jan BorénInstitute of Medicine, Dept of Molecular and Clinical Medicine, University of Gothenburg, SwedenVerified email at wlab.gu.se
Boyang JIBioInnovation Institute, DenmarkVerified email at chalmers.se
Kiran Raosaheb PatilMRC Toxicology Unit, University of CambridgeVerified email at cam.ac.uk
Saeed ShoaieTranslational Systems Biology, King's College LondonVerified email at kcl.ac.uk
anastasia krivoruchkoVerified email at chalmers.se
Irina BorodinaThe Novo Nordisk Foundation Center for Biosustainability, Technical University of DenmarkVerified email at biosustain.dtu.dk
Gregory StephanopoulosW.H. Dow Professor of Chemical Engineering and BiotechnologyVerified email at mit.edu
Francesco GattoKarolinska InstituteVerified email at ki.se
Birgitte RegenbergProfessor of Biology, University of CopenhagenVerified email at bio.ku.dk
Rasmus AgrenChalmers University of TechnologyVerified email at chalmers.se
Björn M HallströmSNIPR BiomeVerified email at sniprbiome.com
Michael C. JewettStanford UniversityVerified email at stanford.edu
Avlant NilssonKarolinska InstitutetVerified email at ki.se
Gombert AKUniversity of Campinas (UNICAMP), Campinas, BrazilVerified email at unicamp.br

Jens Nielsen

Professor in Systems Biology, Chalmers University of Technology, Sweden

Verified email at chalmers.se - Homepage

metabolic engineering metabolism systems biology synthetic biology biotechnology


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Tissue-based map of the human proteome M Uhlén, L Fagerberg, BM Hallström, C Lindskog, P Oksvold, ... Science 347 (6220), 1260419, 2015	14859	2015
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics L Fagerberg, BM Hallström, P Oksvold, C Kampf, D Djureinovic, ... Molecular & cellular proteomics 13 (2), 397-406, 2014	3916	2014
Gut metagenome in European women with normal, impaired and diabetic glucose control FH Karlsson, V Tremaroli, I Nookaew, G Bergström, CJ Behre, ... Nature 498 (7452), 99-103, 2013	3320	2013
Metabolic engineering: principles and methodologies G Stephanopoulos, AA Aristidou, J Nielsen Elsevier, 1998	2088	1998
Bioreaction engineering principles J Villadsen, J Nielsen, G Lidén Springer Science & Business Media, 2011	1484	2011
Fuel ethanol production from lignocellulose: a challenge for metabolic engineering and process integration J Zaldivar, J Nielsen, L Olsson Applied microbiology and biotechnology 56, 17-34, 2001	1458	2001
Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network J Förster, I Famili, P Fu, BØ Palsson, J Nielsen Genome research 13 (2), 244-253, 2003	1452	2003
Symptomatic atherosclerosis is associated with an altered gut metagenome FH Karlsson, F Fåk, I Nookaew, V Tremaroli, B Fagerberg, D Petranovic, ... Nature communications 3 (1), 1245, 2012	1407	2012
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88 HJ Pel, JH de Winde, DB Archer, PS Dyer, G Hofmann, PJ Schaap, ... Nature biotechnology 25 (2), 221-231, 2007	1399	2007
Engineering cellular metabolism J Nielsen, JD Keasling Cell 164 (6), 1185-1197, 2016	1293	2016
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	1229	2013
2023 Focused Update of the 2021 ESC Guidelines for the diagnosis and treatment of acute and chronic heart failure: Developed by the task force for the diagnosis and treatment … TA McDonagh, M Metra, M Adamo, RS Gardner, A Baumbach, M Böhm, ... European Heart Journal 44 (37), 3627-3639, 2023	1200	2023
Minimum information about a biosynthetic gene cluster MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ... Nature chemical biology 11 (9), 625-631, 2015	939	2015
Voluntary running suppresses tumor growth through epinephrine-and IL-6-dependent NK cell mobilization and redistribution L Pedersen, M Idorn, GH Olofsson, B Lauenborg, I Nookaew, RH Hansen, ... Cell metabolism 23 (3), 554-562, 2016	882	2016
Mass spectrometry in metabolome analysis SG Villas‐Bôas, S Mas, M Åkesson, J Smedsgaard, J Nielsen Mass spectrometry reviews 24 (5), 613-646, 2005	855	2005
Roux-en-Y gastric bypass and vertical banded gastroplasty induce long-term changes on the human gut microbiome contributing to fat mass regulation V Tremaroli, F Karlsson, M Werling, M Ståhlman, P Kovatcheva-Datchary, ... Cell metabolism 22 (2), 228-238, 2015	848	2015
Uncovering transcriptional regulation of metabolism by using metabolic network topology KR Patil, J Nielsen Proceedings of the national academy of sciences 102 (8), 2685-2689, 2005	718	2005
Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272-281, 2018	717	2018
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices S Alseekh, A Aharoni, Y Brotman, K Contrepois, J D’Auria, J Ewald, ... Nature methods 18 (7), 747-756, 2021	702	2021
Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods L Väremo, J Nielsen, I Nookaew Nucleic acids research 41 (8), 4378-4391, 2013	700	2013

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