| Clinical information extraction applications: a literature review Y Wang, L Wang, M Rastegar-Mojarad, S Moon, F Shen, N Afzal, S Liu, ... Journal of biomedical informatics 77, 34-49, 2018 | 887 | 2018 |
| CellMiner: a web-based suite of genomic and pharmacologic tools to explore transcript and drug patterns in the NCI-60 cell line set WC Reinhold, M Sunshine, H Liu, S Varma, KW Kohn, J Morris, ... Cancer research 72 (14), 3499-3511, 2012 | 867 | 2012 |
| Overview of BioCreative II gene mention recognition L Smith, LK Tanabe, RJ Ando, CJ Kuo, IF Chung, CN Hsu, YS Lin, ... Genome biology 9, 1-19, 2008 | 562 | 2008 |
| A comparison of word embeddings for the biomedical natural language processing Y Wang, S Liu, N Afzal, M Rastegar-Mojarad, L Wang, F Shen, ... Journal of biomedical informatics 87, 12-20, 2018 | 447 | 2018 |
| CLAMP–a toolkit for efficiently building customized clinical natural language processing pipelines E Soysal, J Wang, M Jiang, Y Wu, S Pakhomov, H Liu, H Xu Journal of the American Medical Informatics Association 25 (3), 331-336, 2018 | 417 | 2018 |
| Overview of BioCreative II gene normalization AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ... Genome biology 9, 1-19, 2008 | 415 | 2008 |
| The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7, 1-17, 2015 | 379 | 2015 |
| Artificial intelligence approaches using natural language processing to advance EHR-based clinical research Y Juhn, H Liu Journal of Allergy and Clinical Immunology 145 (2), 463-469, 2020 | 269 | 2020 |
| Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality H Xu, MC Aldrich, Q Chen, H Liu, NB Peterson, Q Dai, M Levy, A Shah, ... Journal of the American Medical Informatics Association 22 (1), 179-191, 2015 | 262 | 2015 |
| Building effective defect-prediction models in practice AG Koru, H Liu IEEE software 22 (6), 23-29, 2005 | 257 | 2005 |
| A clinical text classification paradigm using weak supervision and deep representation Y Wang, S Sohn, S Liu, F Shen, L Wang, EJ Atkinson, S Amin, H Liu BMC medical informatics and decision making 19, 1-13, 2019 | 234 | 2019 |
| Deep learning and alternative learning strategies for retrospective real-world clinical data D Chen, S Liu, P Kingsbury, S Sohn, CB Storlie, EB Habermann, ... NPJ digital medicine 2 (1), 43, 2019 | 231 | 2019 |
| Clinical characterization and prediction of clinical severity of SARS-CoV-2 infection among US adults using data from the US National COVID Cohort Collaborative TD Bennett, RA Moffitt, JG Hajagos, B Amor, A Anand, MM Bissell, ... JAMA network open 4 (7), e2116901-e2116901, 2021 | 214 | 2021 |
| Gene name ambiguity of eukaryotic nomenclatures L Chen, H Liu, C Friedman Bioinformatics 21 (2), 248-256, 2005 | 208 | 2005 |
| An information extraction framework for cohort identification using electronic health records H Liu, SJ Bielinski, S Sohn, S Murphy, KB Wagholikar, SR Jonnalagadda, ... AMIA Summits on Translational Science Proceedings 2013, 149, 2013 | 207 | 2013 |
| An investigation into the functional form of the size-defect relationship for software modules AG Koru, D Zhang, K El Emam, H Liu IEEE Transactions on Software Engineering 35 (2), 293-304, 2008 | 201 | 2008 |
| Characterizing long COVID: deep phenotype of a complex condition RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... EBioMedicine 74, 2021 | 200 | 2021 |
| The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12, 1-19, 2011 | 174 | 2011 |
| Representing information in patient reports using natural language processing and the extensible markup language C Friedman, G Hripcsak, L Shagina, H Liu Journal of the American Medical Informatics Association 6 (1), 76-87, 1999 | 173 | 1999 |
| Automatic resolution of ambiguous terms based on machine learning and conceptual relations in the UMLS H Liu, SB Johnson, C Friedman Journal of the American Medical Informatics Association 9 (6), 621-636, 2002 | 172 | 2002 |
Sunghwan SohnProfessor of Biomedical Informatics, Mayo ClinicVerified email at mayo.edu