| MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data T Pluskal, S Castillo, A Villar-Briones, M Orešič BMC bioinformatics 11, 1-11, 2010 | 4136 | 2010 |
| Novel theranostic opportunities offered by characterization of altered membrane lipid metabolism in breast cancer progression M Hilvo, C Denkert, L Lehtinen, B Müller, S Brockmöller, ... Cancer research 71 (9), 3236-3245, 2011 | 586 | 2011 |
| Association of lipidome remodeling in the adipocyte membrane with acquired obesity in humans KH Pietiläinen, T Rog, T Seppänen-Laakso, S Virtue, P Gopalacharyulu, ... PLoS biology 9 (6), e1000623, 2011 | 287 | 2011 |
| Algorithms and tools for the preprocessing of LC–MS metabolomics data S Castillo, P Gopalacharyulu, L Yetukuri, M Orešič Chemometrics and Intelligent Laboratory Systems 108 (1), 23-32, 2011 | 228 | 2011 |
| Statistical methods for handling unwanted variation in metabolomics data AMD Livera, M Sysi-Aho, L Jacob, JA Gagnon-Bartsch, S Castillo, ... Analytical chemistry 87 (7), 3606-3615, 2015 | 203 | 2015 |
| Data analysis tool for comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry S Castillo, I Mattila, J Miettinen, M Oresic, T Hyötyläinen Analytical Chemistry 83 (8), 3058-3067, 2011 | 202 | 2011 |
| Prediction of non-alcoholic fatty-liver disease and liver fat content by serum molecular lipids M Orešič, T Hyötyläinen, A Kotronen, P Gopalacharyulu, H Nygren, ... Diabetologia 56, 2266-2274, 2013 | 179 | 2013 |
| Liquid chromatography-mass spectrometry (LC-MS)-based lipidomics for studies of body fluids and tissues H Nygren, T Seppänen-Laakso, S Castillo, T Hyötyläinen, M Orešič Metabolic Profiling: Methods and Protocols, 247-257, 2011 | 161 | 2011 |
| Bioinformatics and computational methods for lipidomics PS Niemelä, S Castillo, M Sysi-Aho, M Orešič Journal of Chromatography B 877 (26), 2855-2862, 2009 | 100 | 2009 |
| Splanchnic balance of free fatty acids, endocannabinoids, and lipids in subjects with nonalcoholic fatty liver disease J Westerbacka, A Kotronen, BA Fielding, J Wahren, L Hodson, J Perttilä, ... Gastroenterology 139 (6), 1961-1971. e1, 2010 | 87 | 2010 |
| Inheritance of brewing-relevant phenotypes in constructed Saccharomyces cerevisiae × Saccharomyces eubayanus hybrids K Krogerus, T Seppänen-Laakso, S Castillo, B Gibson Microbial cell factories 16, 1-22, 2017 | 67 | 2017 |
| Enhanced Triacylglycerol Production With Genetically Modified Trichosporon oleaginosus K Koivuranta, S Castillo, P Jouhten, L Ruohonen, M Penttilä, MG Wiebe Frontiers in microbiology 9, 1337, 2018 | 41 | 2018 |
| Genome wide analysis of protein production load in Trichoderma reesei TM Pakula, H Nygren, D Barth, M Heinonen, S Castillo, M Penttilä, ... Biotechnology for biofuels 9, 1-26, 2016 | 31 | 2016 |
| Exploring the potential of Saccharomyces eubayanus as a parent for new interspecies hybrid strains in winemaking F Magalhães, K Krogerus, S Castillo, A Ortiz-Julien, S Dequin, B Gibson FEMS Yeast Research 17 (5), fox049, 2017 | 25 | 2017 |
| Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction S Castillo, D Barth, M Arvas, TM Pakula, E Pitkänen, P Blomberg, ... Biotechnology for biofuels 9, 1-20, 2016 | 22 | 2016 |
| Principal metabolic flux mode analysis S Bhadra, P Blomberg, S Castillo, J Rousu Bioinformatics 34 (14), 2409-2417, 2018 | 20 | 2018 |
| 2: Modular framework for 267 processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC 268 T Pluskal, S Castillo, A Villar-Briones, MMZ Orešič Bioinformatics 11 (395), 269, 2010 | 20 | 2010 |
| Lager Yeast Design Through Meiotic Segregation of a Saccharomyces cerevisiae × Saccharomyces eubayanus Hybrid K Krogerus, F Magalhães, S Castillo, G Peddinti, V Vidgren, M De Chiara, ... Frontiers in Fungal Biology 2, 733655, 2021 | 14 | 2021 |
| Yeast genome-scale metabolic models for simulating genotype–phenotype relations S Castillo, KR Patil, P Jouhten Yeasts in biotechnology and human health: physiological genomic approaches …, 2019 | 14 | 2019 |
| Machine learning of protein interactions in fungal secretory pathways J Kludas, M Arvas, S Castillo, T Pakula, M Oja, C Brouard, J Jäntti, ... PloS one 11 (7), e0159302, 2016 | 12 | 2016 |
Laxman YetukuriCSC, EspooVerified email at csc.fi
