Metabolite changes in blood predict the onset of tuberculosis J Weiner 3rd, J Maertzdorf, JS Sutherland, FJ Duffy, E Thompson, ... Nature communications 9 (1), 5208, 2018 | 149 | 2018 |
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms J Zyla, M Marczyk, T Domaszewska, SHE Kaufmann, J Polanska, ... Bioinformatics 35 (24), 5146-5154, 2019 | 124 | 2019 |
Increased risk of severe clinical course of COVID-19 in carriers of HLA-C* 04: 01 J Weiner, P Suwalski, M Holtgrewe, A Rakitko, C Thibeault, M Mueller, ... EClinicalMedicine 40, 2021 | 90 | 2021 |
Ranking metrics in gene set enrichment analysis: do they matter? J Zyla, M Marczyk, J Weiner, J Polanska BMC bioinformatics 18, 1-12, 2017 | 73 | 2017 |
Cellular stress promotes NOD1/2‐dependent inflammation via the endogenous metabolite sphingosine‐1‐phosphate G Pei, J Zyla, L He, P Moura‐Alves, H Steinle, P Saikali, L Lozza, ... The EMBO journal 40 (13), e106272, 2021 | 58 | 2021 |
Innate-like Gene Expression of Lung-Resident Memory CD8+ T Cells during Experimental Human Influenza: A Clinical Study S Paterson, S Kar, SK Ung, Z Gardener, E Bergstrom, S Ascough, ... American journal of respiratory and critical care medicine 204 (7), 826-841, 2021 | 23 | 2021 |
The lipid composition of serum-derived small extracellular vesicles in participants of a lung cancer screening study M Smolarz, A Kurczyk, K Jelonek, J Żyła, Ł Mielańczyk, M Sitkiewicz, ... Cancers 13 (14), 3414, 2021 | 19 | 2021 |
Kras mutations and PU.1 promoter methylation are new pathways in murine radiation-induced AML G O’Brien, L Cruz-Garcia, J Zyla, N Brown, R Finnon, J Polanska, C Badie Carcinogenesis 41 (8), 1104-1112, 2020 | 17 | 2020 |
Serum metabolite profiles in participants of lung cancer screening study; comparison of two independent cohorts P Widłak, K Jelonek, A Kurczyk, J Żyła, M Sitkiewicz, E Bottoni, ... Cancers 13 (11), 2714, 2021 | 15 | 2021 |
Platelets restrict the oxidative burst in phagocytes and facilitate primary progressive tuberculosis L Scheuermann, G Pei, T Domaszewska, J Zyla, D Oberbeck-Müller, ... American Journal of Respiratory and Critical Care Medicine 202 (5), 730-744, 2020 | 15 | 2020 |
Combining CDKN1A gene expression and genome-wide SNPs in a twin cohort to gain insight into the heritability of individual radiosensitivity J Zyla, S Kabacik, G O’Brien, S Wakil, N Al-Harbi, J Kaprio, C Badie, ... Functional & integrative genomics 19, 575-585, 2019 | 14 | 2019 |
Screening support system based on patient survey data—Case study on classification of initial, locally collected COVID-19 data J Henzel, J Tobiasz, M Kozielski, M Bach, P Foszner, A Gruca, M Kania, ... Applied Sciences 11 (22), 10790, 2021 | 13* | 2021 |
Weaker protection against tuberculosis in BCG-vaccinated male 129 S2 mice compared to females NE Nieuwenhuizen, J Zyla, U Zedler, S Bandermann, UA Abed, ... Vaccine 39 (50), 7253-7264, 2021 | 12 | 2021 |
Symptom-based early-stage differentiation between SARS-CoV-2 versus other respiratory tract infections—Upper Silesia pilot study J Mika, J Tobiasz, J Zyla, A Papiez, M Bach, A Werner, M Kozielski, ... Scientific reports 11 (1), 13580, 2021 | 11 | 2021 |
Gene set enrichment analysis reveals individual variability in host responses in tuberculosis patients T Domaszewska, J Zyla, R Otto, SHE Kaufmann, J Weiner Frontiers in immunology 12, 694680, 2021 | 9 | 2021 |
Sensitivity, specificity and prioritization of gene set analysis when applying different ranking metrics J Zyla, M Marczyk, J Polanska 10th International Conference on Practical Applications of Computational …, 2016 | 7 | 2016 |
Importance of SNP dependency correction and association integration for gene set analysis in genome-wide association studies M Marczyk, A Macioszek, J Tobiasz, J Polanska, J Zyla Frontiers in Genetics 12, 767358, 2021 | 6 | 2021 |
Seeking genetic signature of radiosensitivity-a novel method for data analysis in case of small sample sizes J Zyla, P Finnon, R Bulman, S Bouffler, C Badie, J Polanska Theoretical Biology and Medical Modelling 11, 1-16, 2014 | 6 | 2014 |
Enhancement of COVID-19 symptom-based screening with quality-based classifier optimisation M Kozielski, J Henzel, J Tobiasz, A Gruca, P Foszner, J Zyla, M Bach, ... Bulletin of the Polish Academy of Sciences. Technical Sciences 69 (4), 2021 | 5 | 2021 |
miR-122 and miR-21 are Stable Components of miRNA Signatures of Early Lung Cancer after Validation in Three Independent Cohorts J Zyla, R Dziadziuszko, M Marczyk, M Sitkiewicz, M Szczepanowska, ... The Journal of Molecular Diagnostics 26 (1), 37-48, 2024 | 4 | 2024 |