| Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array A Matsui, J Ishida, T Morosawa, Y Mochizuki, E Kaminuma, TA Endo, ... Plant and Cell Physiology 49 (8), 1135-1149, 2008 | 609 | 2008 |
| FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs I Abugessaisa, JA Ramilowski, M Lizio, J Severin, A Hasegawa, ... Nucleic acids research 49 (D1), D892-D898, 2021 | 94 | 2021 |
| Identification of the candidate genes regulated by RNA-directed DNA methylation in Arabidopsis Y Kurihara, A Matsui, M Kawashima, E Kaminuma, J Ishida, T Morosawa, ... Biochemical and biophysical research communications 376 (3), 553-557, 2008 | 73 | 2008 |
| QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy G Nelson, U Boehm, S Bagley, P Bajcsy, J Bischof, CM Brown, A Dauphin, ... Journal of microscopy 284 (1), 56-73, 2021 | 57 | 2021 |
| PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning Y Yoshida, Y Makita, N Heida, S Asano, A Matsushima, M Ishii, ... Nucleic acids research 37 (suppl_2), W147-W152, 2009 | 56 | 2009 |
| Effect of restricted feed intake of dams and heat stress on mineral status of newborn calves S Kume, T Toharmat, N Kobayashi Journal of dairy science 81 (6), 1581-1590, 1998 | 55 | 1998 |
| Arabidopsis Tiling Array Analysis to Identify the Stress-Responsive Genes A Matsui, J Ishida, T Morosawa, M Okamoto, JM Kim, Y Kurihara, ... Plant Stress Tolerance: Methods and Protocols, 141-155, 2010 | 42 | 2010 |
| The microRNA cluster C19MC confers differentiation potential into trophoblast lineages upon human pluripotent stem cells N Kobayashi, H Okae, H Hiura, N Kubota, EH Kobayashi, S Shibata, ... Nature communications 13 (1), 3071, 2022 | 41 | 2022 |
| The RIKEN integrated database of mammals H Masuya, Y Makita, N Kobayashi, K Nishikata, Y Yoshida, Y Mochizuki, ... Nucleic acids research 39 (suppl_1), D861-D870, 2011 | 38 | 2011 |
| Semantic-JSON: a lightweight web service interface for Semantic Web contents integrating multiple life science databases N Kobayashi, M Ishii, S Takahashi, Y Mochizuki, A Matsushima, T Toyoda Nucleic acids research 39 (suppl_2), W533-W540, 2011 | 36 | 2011 |
| Statistical search on the Semantic Web N Kobayashi, T Toyoda Bioinformatics 24 (7), 1002-1010, 2008 | 34 | 2008 |
| A patterned human neural tube model using microfluidic gradients X Xue, YS Kim, AI Ponce-Arias, R O’Laughlin, RZ Yan, N Kobayashi, ... Nature 628 (8007), 391-399, 2024 | 33 | 2024 |
| The health care and life sciences community profile for dataset descriptions M Dumontier, AJG Gray, MS Marshall, V Alexiev, P Ansell, G Bader, ... PeerJ 4, e2331, 2016 | 33 | 2016 |
| An Intelligent SPARQL Query Builder for Exploration of Various Life-science Databases. A Yamaguchi, K Kozaki, K Lenz, H Wu, N Kobayashi IESD@ ISWC 1, 2014 | 32 | 2014 |
| OmicBrowse: a browser of multidimensional omics annotations T Toyoda, Y Mochizuki, K Player, N Heida, Norio Kobayashi, Y Sakaki Bioinformatics 23 (4), 524-526, 2007 | 32 | 2007 |
| Trophoblast stem cell-based organoid models of the human placental barrier T Hori, H Okae, S Shibata, N Kobayashi, EH Kobayashi, A Oike, A Sekiya, ... Nature Communications 15 (1), 962, 2024 | 26 | 2024 |
| RIKEN MetaDatabase: a database platform for health care and life sciences as a microcosm of linked open data cloud N Kobayashi, S Kume, K Lenz, H Masuya International Journal on Semantic Web and Information Systems (IJSWIS) 14 (1 …, 2018 | 26 | 2018 |
| Novel stress-inducible antisense RNAs of protein-coding loci are synthesized by RNA-dependent RNA polymerase A Matsui, K Iida, M Tanaka, K Yamaguchi, K Mizuhashi, JM Kim, ... Plant physiology 175 (1), 457-472, 2017 | 22 | 2017 |
| An Advanced Strategy for Integration of Biological Measurement Data. H Masuya, GV Gkoutos, N Tanaka, K Waki, Y Okuda, T Kushida, ... ICBO, 2011 | 22 | 2011 |
| Unique features and emerging in vitro models of human placental development S Shibata, EH Kobayashi, N Kobayashi, A Oike, H Okae, T Arima Reproductive Medicine and Biology 19 (4), 301-313, 2020 | 20 | 2020 |