| An omics-based framework for assessing the health risk of antimicrobial resistance genes AN Zhang, JM Gaston, CL Dai, S Zhao, M Poyet, M Groussin, X Yin, LG Li, ... Nature communications 12 (1), 4765, 2021 | 513 | 2021 |
| ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database Y Yang, X Jiang, B Chai, L Ma, B Li, A Zhang, JR Cole, JM Tiedje, ... Bioinformatics 32 (15), 2346-2351, 2016 | 311 | 2016 |
| Integrated biogeography of planktonic and sedimentary bacterial communities in the Yangtze River T Liu, AN Zhang, J Wang, S Liu, X Jiang, C Dang, T Ma, S Liu, Q Chen, ... Microbiome 6, 1-14, 2018 | 259 | 2018 |
| Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection AN Zhang, LG Li, L Ma, MR Gillings, JM Tiedje, T Zhang Microbiome 6, 1-14, 2018 | 104 | 2018 |
| ARGs-OAP v3. 0: Antibiotic-resistance gene database curation and analysis pipeline optimization X Yin, X Zheng, L Li, AN Zhang, XT Jiang, T Zhang Engineering 27, 234-241, 2023 | 74 | 2023 |
| Effects of sample preservation and DNA extraction on enumeration of antibiotic resistance genes in wastewater AD Li, JW Metch, Y Wang, E Garner, AN Zhang, MV Riquelme, ... FEMS microbiology ecology 94 (2), fix189, 2018 | 57 | 2018 |
| Gut Ruminococcaceae levels at baseline correlate with risk of antibiotic-associated diarrhea X Gu, JXY Sim, WL Lee, L Cui, YFZ Chan, ED Chang, YE Teh, AN Zhang, ... Iscience 25 (1), 2022 | 42 | 2022 |
| Development of Quantitative Real-time PCR Assays for Different Clades of “Candidatus Accumulibacter” AN Zhang, Y Mao, T Zhang Scientific reports 6 (1), 23993, 2016 | 40 | 2016 |
| An omics-based framework for assessing the health risk of antimicrobial resistance genes. Nat Commun 12: 4765 AN Zhang, JM Gaston, CL Dai, S Zhao, M Poyet, M Groussin, X Yin, LG Li, ... | 31 | 2021 |
| Online searching platform for the antibiotic resistome in bacterial tree of life and global habitats AN Zhang, CJ Hou, M Negi, LG Li, T Zhang FEMS Microbiology Ecology 96 (7), fiaa107, 2020 | 25 | 2020 |
| Seasonal prevalence of ammonia-oxidizing archaea in a full-scale municipal wastewater treatment plant treating saline wastewater revealed by a 6-year time-series analysis Y Wang, W Qin, X Jiang, F Ju, Y Mao, A Zhang, DA Stahl, T Zhang Environmental Science & Technology 55 (4), 2662-2673, 2021 | 18 | 2021 |
| Choosing your battles: which resistance genes warrant global action? AN Zhang, LG Li, X Yin, CL Dai, M Groussin, M Poyet, E Topp, ... BioRxiv, 784322, 2019 | 18 | 2019 |
| Underrepresented high diversity of class 1 integrons in the environment uncovered by PacBio sequencing using a new primer Y Yang, AN Zhang, Y Che, L Liu, Y Deng, T Zhang Science of the Total Environment 787, 147611, 2021 | 15 | 2021 |
| Genomic resolution of bacterial populations in saccharin and cyclamate degradation Y Deng, Y Wang, Y Xia, AN Zhang, Y Zhao, T Zhang Science of the Total Environment 658, 357-366, 2019 | 14 | 2019 |
| Mining traits for the enrichment and isolation of not-yet-cultured populations AN Zhang, Y Mao, Y Wang, T Zhang Microbiome 7, 1-13, 2019 | 13 | 2019 |
| Fast and accurate variant identification tool for sequencing-based studies JM Gaston, EJ Alm, AN Zhang BMC biology 22 (1), 90, 2024 | 4 | 2024 |
| ARGs-OSP: online searching platform for antibiotic resistance genes distribution in metagenomic database and bacterial whole genome database AN Zhang, CJ Hou, LG Li, T Zhang bioRxiv, 337675, 2018 | 3 | 2018 |
| Low gut Ruminococcaceae levels are associated with occurrence of antibiotic-associated diarrhea X Gu, JXY Sim, WL Lee, L Cui, YFZ Chan, ED Chang, YE Teh, AN Zhang, ... medRxiv, 2021.09. 23.21263551, 2021 | 2 | 2021 |
| Multi-site sampling and risk prioritization reveals the public health relevance of antibiotic resistance genes found in wastewater environments CL Dai, C Duvallet, AN Zhang, MG Matus, N Ghaeli, S Park, N Endo, ... BioRxiv, 562496, 2019 | 2 | 2019 |
| Temporal dynamics of gut microbiomes in non-industrialized urban Amazonia AP Schaan, A Vidal, AN Zhang, M Poyet, EJ Alm, M Groussin, ... Msystems 9 (3), e00707-23, 2024 | 1 | 2024 |
Eric AlmProfessor of Biological Engineering, MITVerified email at mit.edu