Parallel approaches for the artificial bee colony algorithm RS Parpinelli, CMV Benitez, HS Lopes Handbook of Swarm Intelligence: Concepts, Principles and Applications, 329-345, 2011 | 60 | 2011 |
Parallel artificial bee colony algorithm approaches for protein structure prediction using the 3dhp-sc model CM Vargas Benítez, HS Lopes Intelligent Distributed Computing IV: Proceedings of the 4th International …, 2010 | 45 | 2010 |
Performance Analysis of Swarm Intelligence Algorithms for the 3D-AB off-lattice Protein Folding Problem. RS Parpinelli, CMV Benitiez, J Cordeiro, HS Lopes J. Multiple Valued Log. Soft Comput. 22 (3), 267-286, 2014 | 26 | 2014 |
Population-based harmony search using GPU applied to protein structure prediction MH Scalabrin, RS Parpinelli, CMV Benítez, HS Lopes International Journal of Computational Science and Engineering 9 (1-2), 106-118, 2014 | 25 | 2014 |
Protein structure prediction with the 3D-HP side-chain model using a master–slave parallel genetic algorithm CMV Benítez, HS Lopes Journal of the Brazilian Computer Society 16, 69-78, 2010 | 20 | 2010 |
Hierarchical parallel genetic algorithm applied to the three-dimensional HP side-chain protein folding problem CMV Benitez, HS Lopes 2010 IEEE International Conference on Systems, Man and Cybernetics, 2669-2676, 2010 | 17 | 2010 |
Parallelism, hybridism and coevolution in a multi‐level ABC‐GA approach for the protein structure prediction problem CMV Benitez, RS Parpinelli, HS Lopes Concurrency and Computation: Practice and Experience 24 (6), 635-646, 2012 | 16 | 2012 |
A parallel genetic algorithm for protein folding prediction using the 3d-hp side chain model CMV Benitez, HS Lopes 2009 IEEE Congress on Evolutionary Computation, 1297-1304, 2009 | 16 | 2009 |
A deep bidirectional long short-term memory approach applied to the protein secondary structure prediction problem LT Hattori, CMV Benitez, HS Lopes 2017 IEEE Latin American Conference on Computational Intelligence (LA-CCI), 1-6, 2017 | 15 | 2017 |
A heterogeneous parallel ecologically-inspired approach applied to the 3D-AB off-lattice protein structure prediction problem CMV Benítez, RS Parpinelli, HS Lopes 2013 BRICS Congress on Computational Intelligence and 11th Brazilian …, 2013 | 12 | 2013 |
Molecular dynamics for simulating the protein folding process using the 3D AB off-lattice model CMV Benítez, HS Lopes Advances in Bioinformatics and Computational Biology: 7th Brazilian …, 2012 | 7 | 2012 |
Handbook of Swarm Intelligence RS Parpinelli, CM Benitez, HS Lopes Berlin, Heidelberg: Springer, 2011 | 7 | 2011 |
A novel approach to protein folding prediction based on long short-term memory networks: a preliminary investigation and analysis LT Hattori, CMV Benitez, M Gutoski, NMR Aquino, HS Lopes 2018 International Joint Conference on Neural Networks (IJCNN), 1-8, 2018 | 5 | 2018 |
An ecologically-inspired parallel approach applied to the protein structure reconstruction from contact maps CMV Benítez, RS Parpinelli, HS Lopes Proceedings of the 2016 on Genetic and Evolutionary Computation Conference …, 2016 | 5 | 2016 |
Ab-initio protein folding using molecular dynamics and a simplified off-lattice model C Benítez, H Silvério Lopes Journal of Bionanoscience 7 (4), 391-402, 2013 | 4 | 2013 |
Simulation of the dynamic behavior of one-dimensional cellular automata using reconfigurable computing WR Weinert, C Benitez, HS Lopes, CRE Lima International Workshop on Applied Reconfigurable Computing, 385-390, 2007 | 4 | 2007 |
Gene expression programming for evolving two-dimensional cellular automata in a distributed environment CM Vargas Benítez, W Weinert, HS Lopes Intelligent Distributed Computing VIII, 107-117, 2015 | 3 | 2015 |
Reconfigurable hardware computing for accelerating protein folding simulations using the harmony search algorithm and the 3d-hp-side chain model CMV Benítez, M Scalabrin, HS Lopes, CRE Lima International Conference on Algorithms and Architectures for Parallel …, 2011 | 3 | 2011 |
PathMolD-AB: Spatiotemporal pathways of protein folding using parallel molecular dynamics with a coarse-grained model LT Hattori, BA Pinheiro, RB Frigori, CMV Benítez, HS Lopes Computational Biology and Chemistry 87, 107301, 2020 | 2 | 2020 |
A Comparative Study of Machine Learning and Evolutionary Computation Approaches for Protein Secondary Structure Classification CMV Benítez, C Chidambaram, F Hembecker, HS Lopes Computational Biology and Applied Bioinformatics, 2011 | 2 | 2011 |