| Unified rational protein engineering with sequence-based deep representation learning EC Alley, G Khimulya, S Biswas, M AlQuraishi, GM Church Nature methods 16 (12), 1315-1322, 2019 | 1124 | 2019 |
| Low-N protein engineering with data-efficient deep learning S Biswas, G Khimulya, EC Alley, KM Esvelt, GM Church Nature methods 18 (4), 389-396, 2021 | 437 | 2021 |
| EpiFactors: a comprehensive database of human epigenetic factors and complexes YA Medvedeva, A Lennartsson, R Ehsani, IV Kulakovskiy, IE Vorontsov, ... Database 2015, bav067, 2015 | 311 | 2015 |
| PERFECTOS-APE - Predicting Regulatory Functional Effect of SNPs by Approximate P-value Estimation IE Vorontsov, IV Kulakovskiy, G Khimulya, DD Nikolaeva, VJ Makeev Proceedings of the International Conference on Bioinformatics Models …, 2015 | 40 | 2015 |
| Unified rational protein engineering with sequence-only deep representation learning. bioRxiv EC Alley, G Khimulya, S Biswas, M AlQuraishi, GM Church | 21 | 2019 |
| Negative selection maintains transcription factor binding motifs in human cancer IE Vorontsov, G Khimulya, EN Lukianova, DD Nikolaeva, IA Eliseeva, ... BMC genomics 17, 263-276, 2016 | 21 | 2016 |
| FANTOM Consortium TF, Drabløs F. EpiFactors: a comprehensive database of human epigenetic factors and complexes YA Medvedeva, A Lennartsson, R Ehsani, IV Kulakovskiy, IE Vorontsov, ... Database (Oxford). Oxford University Press, 2015 | 5 | 2015 |
| Unified rational protein engineering with sequence-only deep representation learning EC Alley, G Khimulya, S Biswas, M AlQuraishi, GM Church Biorxiv, 0 | 4 | |
| Consortium TF, Drablas F YA Medvedeva, A Lennartsson, R Ehsani, IV Kulakovskiy, IE Vorontsov, ... Database, 2015 | 3 | 2015 |
| Systems and methods for rational protein engineering with deep representation learning G Khimulya, E Alley, S Biswas US Patent 12,040,050, 2024 | | 2024 |
Ivan KulakovskiyInstitute of Protein Research RASVerified email at vigg.ru
