Esterase sequence composition patterns for the identification of catalytic triad microenvironment motifs M Babic, P Jankovic, S Marchesan, G Mausa, D Kalafatovic Journal of chemical information and modeling 62 (24), 6398-6410, 2022 | 7 | 2022 |
Factors influencing the catalytic activity of metal-dependent histidine-rich peptides: sequence, conformation, stereochemistry, self-assembly or their interplay? P Janković, M Babić, M Perčić, AS Pina, D Kalafatovic Molecular Systems Design & Engineering, 1 - 10, 2023 | 6 | 2023 |
Reshaping the discovery of self-assembling peptides with generative AI guided by hybrid deep learning M Njirjak, L Žužić, M Babić, P Janković, E Otović, D Kalafatovic, G Mauša Nature machine intelligence, 1-14, 2024 | 2 | 2024 |
Evaluacija aktivnih mjesta enzima i usporedba sa kataliticki aktivnim peptidima koji kataliziraju hidrolizu estera M Babić University of Rijeka. Department of Biotechnology, 2021 | 1 | 2021 |
Early evolution of mumps-HCV chimeric viruses in Vero cells induces loss of HCV gene expression and promotes accumulation of substitutions uncharacteristic of mumps strains D Pali, D Forčić, M Jagušić, TK Gulija, M Jurković, M Babić, D Kalafatovic, ... Virology 603, 110379, 2025 | | 2025 |
Modeling the aggregation of self-assembling histidine rich peptides in the presence of zinc (II) ions M Babić, P Janković, D Kalafatovic Affinity 2023, The 25th meeting of the International Society for Molecular …, 2023 | | 2023 |
Theoretical evaluation of enzyme active sites and catalytic peptides involved in ester hydrolysis M Babić, G Mauša, Ž Svedružić, D Kalafatovića BOOK OF ABSTRACTS, 314, 2021 | | 2021 |
Soft Computing Guided Discovery of Active Peptides G Mauša, M Njirjak, E Otović, L Žužić, M Babić, P Janković, D Kalafatovic 28th American Peptide Symposium, 0 | | |
Effects of cluster analysis inputs for peptide self-assembly and aggregation simulations M Babić, D Kalafatović 37th European Peptide Symposium and 14th International Peptide Symposium, 0 | | |
Comparing the effectiveness of Coarse-Grained simulations in peptide self-assembly and aggregation with different structural inputs M Babić, D Kalafatović Ljetna konferencija Hrvatskog kemijskog društva Rijeka-Pula 2024, 0 | | |
Exploring the Effect of Amino Acid Composition, Cyclization, and Chirality on the Catalytic and Self-Assembly Properties of Histidine-Rich Peptides P Janković, M Babić, M Perčić, AS Pina, D Kalafatovic Peptide Self-Assembly Manchester 2023, 0 | | |
Can we improve Coarse-Grained simulations of peptide selfassembly and aggregation by cluster analysis inputs? M Babić, D Kalafatović 37th European Peptide Symposium and 14th International Peptide Symposium, 0 | | |
Deep learning for Peptide Classification: From Data to Effective Models M Njirjak, M Babić, P Jankovic, E Otović, D Kalafatovic, G Mauša | | |